Populus trichocarpa (black cottonwood): 7486715
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Entry
7486715 CDS
T01077
Name
(RefSeq) TPR repeat-containing thioredoxin TDX isoform X1
KO
K09560
suppressor of tumorigenicity protein 13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7486715
04131 Membrane trafficking [BR:
pop04131
]
7486715
Chaperones and folding catalysts [BR:
pop03110
]
Other chaperones and cochaperones
Others
7486715
Membrane trafficking [BR:
pop04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Co-chaperones
7486715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredoxin
TPR_2
TPR_1
TPR_9
TPR_11
TPR_19
TPR_16
TPR_14
Thioredoxin_2
Thioredoxin_9
OST3_OST6
Thioredoxin_8
TPR_17
TraF
Glutaredoxin
AhpC-TSA
Thioredoxin_7
Motif
Other DBs
NCBI-GeneID:
7486715
NCBI-ProteinID:
XP_006376711
UniProt:
U5FTH0
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All DBs
Position
12:4091023..4095446
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AA seq
325 aa
AA seq
DB search
MSDSGECYDSKRPIEDDDDDIVESDIDLDNTDVVEPDNDPPQKMGDPAVEVTEEKRDAAQ
TEKAKAMDAISEGNLDEAIDHLTEAIMLNPISAILYATRASVFVKLKKPHAAIRDADAAL
AINPDSAKGYKVRGMARAMLGQWEQAASELQMASKLDYDDEIGSVLKKVEPNARKIEEHR
IKYERLQKERELRKAERERKQEAEPQEREALSALNEGQVIGIHSARELDPKLNAASKTSR
LAILYFTATWCGPCRMISPIFTSLAAKYPKVVFLKVDIDEARDVASSWNISSVPTFYFTK
NGKEIDKVVGADKNGLERKIEQHAG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactctggggaatgctatgattccaaaagaccaattgaagatgatgatgatgat
attgttgagtctgatattgacttggataatactgatgttgtggaacctgataatgatcct
ccacaaaagatgggagatcctgcagttgaagttacagaagaaaagcgggatgctgctcaa
actgaaaaggcaaaagctatggatgcaatttctgaaggtaacctggatgaagccatagat
catttaacagaagccatcatgttgaatccaatttcagctatattatatgccacgcgagct
agtgtctttgttaaactgaagaaacctcatgctgcaattcgtgacgctgatgctgctctg
gcaatcaatccagactctgcaaaaggatataaagtacgaggtatggccagagccatgtta
ggccaatgggaacaagcagcaagtgagctgcaaatggcatcaaagttggattatgatgat
gagattggttcagtgctgaaaaaggttgaacctaatgcacgcaaaattgaagagcatcgc
ataaaatatgaacgcctgcagaaagaaagggagctaaggaaagctgaacgtgaaagaaaa
caagaagctgaaccccaagaaagagaagccttatctgctctgaatgaagggcaagttata
ggcattcattctgctagggaactagatcccaaactaaatgctgcatcaaaaacttctcgc
cttgcaatcttgtacttcacggcaacatggtgtgggccatgtcgtatgatttctcccatt
ttcacaagcttagctgcaaagtacccgaaagttgttttcttgaaagttgacatagacgag
gcaagggatgttgcttcaagctggaatatcagcagtgttcctaccttctactttacaaag
aatggcaaggagattgacaaggttgtgggggctgataaaaatggactggaaaggaaaatt
gaacaacatgcaggctag
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integrated database retrieval system
