Populus trichocarpa (black cottonwood): 7486808
Help
Entry
7486808 CDS
T01077
Name
(RefSeq) two-component response regulator-like APRR5 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7486808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
HNOB
Motif
Other DBs
NCBI-GeneID:
7486808
NCBI-ProteinID:
XP_024440868
LinkDB
All DBs
Position
14:7107663..7112740
Genome browser
AA seq
697 aa
AA seq
DB search
MGEVVVSSSSEEVEGMAVELETEKKDIGSSEVVRWEKFLPRMVLSVLLVEADDSTRQIIA
ALLRKCSYRVAAVPDGLMAWETLKGGPHNIDLILTEVELPLISGYALLTLVTEHAVCKNI
PVIMMSSQDSISMVLKCMLKGAADFLIKPVRKNELRNLWQHVWRRQTLSAGQIPQNLHKV
EASSEINAASNGSSDSVMSSRKNKDCSEKGCDAQSSCTTPCLEAESAHMQNMQGLSQMKY
RSASNLSNTDREEFEECAKLDKSPVTPENKTGVFVPERPNRMESDGEPCSGAYNPTSLRL
LEEHACAKSAIQDENSRPENDRGLANSSFGCDDVPFESSSGAIDLIGTLNNGPKTTYVHS
SLHYGTNKFEFAPQLELSLKRLYPSSSKNQGVDERHALNHSHASAFSWYNSKTLQPPFPA
SASNGSDSKEEASKSPELSSNQHAQNINSISQRHGATLSGNQDMTIPIIGQSGKAELAYP
SPRHGLIPVRRGMLDNISTEYGHDFSPLYYTQSSAAWSPKLAGWQQSPYPLSTSIHSNPD
IHDSEKNHRCSDETTYNSVDQNDHQQNNKGPADEVRHDSPAAGQSTGGLCNGVINHNKSS
AYESFGSRDDGNAKEKAMAQDNLNDGDNFNRDGFRGIDSLRSSQREAALTKFRLKRKDRC
YEKKVRYQSRKRLAEQRPRVKGQFVRQVQNDSPIANG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggttgtggtgagtagcagcagtgaagaggtggaggggatggcggtggagtta
gagacagagaagaaggatattggatcatcggaggtggttcgatgggaaaagtttctacca
aggatggtgctcagcgttcttttggttgaagctgatgattctactcgtcagattattgct
gctcttctccgaaaatgcagttacagagttgctgctgttcctgatggattaatggcatgg
gagactttgaagggtggacctcataacatagatctcatattaactgaagtggagctgcct
ttaatatcaggatatgcacttcttactttggtcacggagcatgctgtttgcaaaaacatt
cctgtcataatgatgtcttcacaagattcaattagcatggttctgaagtgcatgttaaaa
ggagcagctgactttctcattaagcctgttaggaagaatgaattgaggaacttgtggcag
catgtttggaggaggcaaactctaagtgctggacaaatccctcaaaacttgcataaagtc
gaggcctcatctgaaatcaacgctgcaagcaatggttcgagtgactctgtgatgtcttcg
cggaaaaataaggattgcagcgagaaagggtgtgatgcccaaagctcttgtacgacccct
tgcttggaagctgagagtgctcacatgcaaaatatgcagggactttcacagatgaagtat
aggagtgcttcaaatctgagcaacacagatagagaggagttcgaagagtgtgccaaatta
gataaaagccctgtaactcctgagaacaagactggagtatttgtaccagaaaggccgaac
cgaatggagtcagatggagaaccgtgcagtggagcttataatccaacttctttgagactg
ctagaagagcacgcttgtgccaagtcagcaattcaagatgaaaattcgaggccagaaaat
gacagggggcttgctaatagctcctttggctgcgatgatgtaccttttgaatcctcaagt
ggagccattgacttgattggtaccttaaataatggtccaaagaccacatatgtacactct
agtttacattatggcacaaacaagttcgaatttgctccacagcttgaactctctctcaaa
agattgtatcccagcagctcaaagaaccagggggtagatgaaagacatgcactgaaccat
tcccatgcctcagccttctcatggtacaatagcaagacattgcaacctccttttccagca
tctgccagtaatggttctgattccaaggaagaagccagcaagtctcctgagctgtcatcc
aatcaacatgctcaaaacattaattctatttctcagagacatggtgccactttgagtggg
aatcaagatatgaccattccaatcattggccaatctgggaaggctgaattagcatatcca
agccctcgacatggattgattcctgttcgaaggggaatgctcgacaatatatctaccgaa
tacggtcatgatttctcccctctatattatactcaatcaagtgcagcatggagtcccaaa
cttgctgggtggcaacagtctccatatcctcttagtacctcaattcattcaaatcctgat
attcatgattctgagaaaaatcacaggtgttctgatgaaactacttacaactctgttgac
caaaatgatcatcagcagaacaataagggacctgcggatgaagtgagacatgactcacct
gctgctggtcagagtactggtggtttatgtaatggtgttatcaatcataataagagcagt
gcatatgaaagctttggcagtagagatgatggaaatgccaaagagaaggccatggctcaa
gataatttgaatgatggggacaacttcaatcgtgatggttttagagggatagattccctt
cgctccagccaaagagaagctgctctaacaaagttccgactgaagcggaaagatcgatgc
tatgagaaaaaggttcgataccaaagccggaaaagactggcagagcaacgtcctcgggtg
aaaggacagtttgttcgtcaagtgcaaaatgattccccaattgctaatggttga
DBGET
integrated database retrieval system
