Populus trichocarpa (black cottonwood): 7486842
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Entry
7486842 CDS
T01077
Name
(RefSeq) proline--tRNA ligase, cytoplasmic
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
7486842
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
7486842
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7486842
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
7486842
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
7486842
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
7486842
Prokaryotic type
7486842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ProRS-C_1
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
7486842
NCBI-ProteinID:
XP_006375417
UniProt:
A9PFZ9
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Position
14:complement(7576832..7583291)
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AA seq
498 aa
AA seq
DB search
MAGGKKKEVKKETGLGLSFKKEENFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEI
MQVFFDAEIKKMKIKNCYFPLFVSSSVLEKEKDHIEGFAPEVAWVTKSGKSDLEIPIAIR
PTSETVMYPYFSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATK
QEADEEVLQILELYRRIYEEFLAIPIIKGKKSEMEKFAGGLYTTSVEAFIPNTGRGIQGA
TSHCLGQNFAKMFEINFENEKGEKGMAWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVSS
VQVIVVPVPFKDANTQGIFDACAATVDTLCEAGIRAEADYRENYSPGWKYSHWEMKGVPL
RIEIGPKDLANNQVRAVRRDNAAKVDISCDNLAEKVKDMLDDIQKSMFDAAKQKRDACIQ
VAKTWDEFKEALSQRKMILAPWCDEEEVEKDVKDRTRGEMGAAKSLCSPFDQPELPEGTT
CFASGKPAKKWTYWGRSY
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctggtggtaaaaagaaggaggttaagaaagagactgggttaggtctctctttcaaa
aaggaagagaattttggggaatggtactcagaggtggttgtgaatggggagatgattgaa
tattatgacatttctggttgctatattctgaggccatgggcaatgtcaatatgggagatt
atgcaagtattctttgatgcagaaatcaagaaaatgaaaattaagaattgctacttccct
ctttttgtttcatctagtgttctggaaaaggaaaaggatcacattgagggctttgctcca
gaggttgcttgggtgacaaagtcaggaaaatctgacttggagattcctattgccatccgt
ccaactagtgagactgttatgtatccctatttttctaagtggatcaggggacaccgtgac
ctgcctctgaaactcaaccaatggtgcaatgttgttcgttgggagttcagcaatcctaca
ccatttatcaggagccgggagttcctctggcaggaagggcacactgcttttgcaacaaag
caagaagcagatgaagaggtccttcaaatattggaactgtacagacgcatatatgaagaa
ttcttggctattcctattataaagggcaagaaaagtgagatggagaagtttgctggtgga
ctttacacaactagcgttgaggcatttattcccaacactggacgtggtatccaaggtgca
acttctcattgtctgggccaaaattttgcaaaaatgtttgaaataaacttcgaaaatgag
aagggggagaagggaatggcctggcagaactcttgggcctatagtactcgaacgattgga
gtcatggtgatggttcatggtgatgacaaaggcttggttctgccacctaaagtgtcatct
gtccaagttatcgtcgttcctgtgcctttcaaagatgctaatactcaaggaatctttgat
gcatgtgctgcaactgtggatactttgtgtgaagcaggtattcgtgctgaggctgattac
agagagaattactcacctggttggaaatactctcactgggaaatgaaaggtgttcctctg
aggattgaaattgggcccaaagatttggcaaataatcaggtacgtgctgttcgccgtgac
aatgcagcaaaagtggatatcagttgtgacaatttggcggagaaagtaaaggatatgctg
gatgatattcaaaagagcatgttcgatgctgctaaacaaaagcgagatgcttgcattcaa
gttgcgaaaacttgggatgaattcaaggaagctctcagtcaaaggaaaatgatcttagct
ccttggtgtgatgaggaggaggtggaaaaggatgtgaaagatcgaacaagaggtgaaatg
ggagcagccaagagtctttgttccccatttgaccagcccgagctccctgaaggtactaca
tgctttgcttctggaaagcctgcaaaaaagtggacctactggggcaggagttactag
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