Populus trichocarpa (black cottonwood): 7486854
Help
Entry
7486854 CDS
T01077
Name
(RefSeq) probable pectinesterase/pectinesterase inhibitor 25
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
7486854
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
7486854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
7486854
NCBI-ProteinID:
XP_024463254
LinkDB
All DBs
Position
8:551563..556856
Genome browser
AA seq
586 aa
AA seq
DB search
MQHPPFLFLFLAFLSIFSPLLISSQSPPPPPPVPPPPPPVAPQSPSDACKSTLYPKLCRS
ILTTFPSSSSNPYEYSKFSVKQCHKQAKRLSKVINYHLTHKNQRSKMTHEEFGALQDCHE
LMELNVDYFETISSELKSAESMNDVLVERVKSLLSGVVTNQQSCYDGLVQSKSSIASALS
VPLSNGTRLYSVSLALVTHSLEKNLKKKKGRKGSHHHGILTKGVREPLETLIKALKRTAS
CHKSSNCHRGERILSDDSGDGILLNDSVIVGPYGADNFTTITDAIAFAPNSSTPEDGYFV
IFVREGIYEEYVVVPKNKKNIMMIGEGINRTIITGNHSVMDGWTTFNSSTFAVSGERFVG
VYITFRNTAGPQKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDF
IFGNAAAVFQNCNLYARKPMLNQKNAFTAQGRTDPNQNTGISIQNCTIEAAPDLAMDKNS
TGSNSTSNFLGRPWKVYSRTVIMQSYIGELIQPAGWLEWNGTVGLDTIYYGEFQNYGPGS
NTSRRVKWPGYNLMNATQAANFTVYNLTTGDTWLPYTDIPFSGGLL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacccaccattcttgtttctcttccttgcctttctttccatcttttcacctttg
ttaatctcctctcaatctccaccaccaccaccaccggtaccaccaccaccaccaccggta
gcaccacaatcgccttccgatgcatgcaaatccaccctctatcctaagctttgtcgttca
atcttaacaacattcccttcatcttcttcgaacccttatgagtacagcaagttttcagtc
aaacaatgccataaacaagcaaaaagattgtctaaagttataaactatcacttaacgcac
aaaaaccaacgttccaagatgacccatgaagagtttggtgctttacaagattgccatgag
ctcatggaactcaacgtggactactttgagaccatatctagtgagttgaaatcagccgag
tcaatgaatgatgtgttggtcgagagagtcaagagtttgctcagtggggtagtgaccaac
caacaatcttgctacgacgggttggttcagtccaagagcagcattgccagtgctctgtct
gtgcctctctctaatggcactcgattgtatagtgtgtctctagccttggtcacacattca
ctggagaagaatttgaagaagaagaagggaagaaaagggtctcatcatcatggaatcttg
acgaagggggttcgtgaaccactggaaactcttatcaaggctttaaagagaacagcatcc
tgccataaatcaagcaattgccacaggggagaacgcatcctttctgatgattctggcgac
gggattcttctaaatgattcagtgattgttggcccttatggcgctgacaactttacaacc
attacagatgccattgcatttgctccaaacagttcaacacctgaagatggttactttgtg
atttttgttagagaagggatttatgaggagtatgttgtggttcccaaaaataagaagaac
ataatgatgattggagaagggattaatcggaccatcatcacgggaaaccatagtgtaatg
gatggctggacaacctttaattcttcgacttttgctgtttctggggagcgatttgtggga
gtatacattacgttcaggaacacggcaggtcctcagaagcaccaagcagtagctctgagg
aacaatgctgatctctccactttttaccggtgcagctttgaaggctatcaggatactctt
tatgtgcattccttgaggcaattctacagggaatgtgatatatatggaactgtagatttc
attttcggaaatgctgctgctgtctttcagaactgcaatttatatgctcgtaagccaatg
cttaaccagaagaatgccttcactgcgcaaggtcgtactgatccaaaccaaaatactggg
atctccattcaaaattgcacaattgaggctgcacctgatttggctatggacaagaactcg
acaggcagtaactccacttcgaactttttggggcgaccttggaaggtgtactctagaact
gtgatcatgcaatcgtatatcggagagctgattcagccagctggatggctagaatggaat
ggaactgttggattagacactatttactatggtgagtttcagaattatgggcctggttca
aacactagcaggagagtgaaatggcctggttataatcttatgaatgctacgcaagctgcg
aattttactgtctacaatttaacaacgggggatacttggttgccttacactgacataccc
ttctctggaggactactttga
DBGET
integrated database retrieval system
