Populus trichocarpa (black cottonwood): 7487061
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Entry
7487061 CDS
T01077
Name
(RefSeq) calpain-type cysteine protease DEK1 isoform X1
KO
K25378
calpain-type cysteine protease DEK1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7487061
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C2: calpain family
7487061
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
7487061
NCBI-ProteinID:
XP_024439903
LinkDB
All DBs
Position
1:233895..248920
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AA seq
2158 aa
AA seq
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MEGDQHGIVLACAISGTLFAVLGSASFSILWAVNWRPWRIYSWIFARKWPHILQGPQLGI
LCRFLSLSAWMIVVSPVLMLVMWGSWLIVVLNRDIIGLAVIMAGTALLLAFYSIMLWWRT
QWQSSRAVAILLLLAVALLCAYELCAVYVTAGKNASERYSPSGFFFGVSAIALAINMLFI
CRMVFNGNGLDVDEYVRRAYKFAYSDCIEMGPIPCSPEPPEPNELYPRQSSRASHLGLLY
FGSLVVLLVYSILYGLTATEARWLGFITSAAVIILDWNMGACLYGFQLLQSRVVALFVAG
TSRVFLFCFGVHYWYLGHCISYAIVASVLLGAAVSRHLSVTNPLAARRDALQSTVIRLRE
GFRRKEQNTSSSSSEGCGSSVKRSSSIEAGPLGNIVDSGNQLAVQCTTDSSNWNNVLCRN
ASCHEGINSDKSTDSGRPSLALHSSSCRSVVQEPEAGTSGDKKFDLNSSPVVCSSSGLDS
QCCESSASTSANQQLLDLNLALAFQERLNDPRITSMLKKRARQGNRELATLLQDKGLDPN
FAMMLKEKNLDHTILALLQRNSLDADRDHRDNIDITIVDSNSVDNVMPNQISLSEELRLQ
GREKWLQLSRFVLHHIAGTPERAWVLFSFIFIVETTILAIVRPKIIKIINTTHQQFELGI
AVFLLSLVVCSIMTFLRSLQVEEMAMTSKPRKYGVIAWLLSTGVGLLLSFLSKSSLLLGL
SLTVPLMVACLSVAIPIWIHNGYQFWVHQVQSAGHTENHRPPGTKEGIVLIICTIVFIGS
VLALGGIVSAKPLDDLGYRALTSGQKSFCSPYASPAYLGWVMASAIALIVTGVLPIISWF
ATYRFSLSSAVCVGIFAVVLVAFCGTSYLEVVQSRDDQVPTKGDFLAALLPLVCIPALLS
LCCGLLKWKDDDWKLSRGVYIFVIIGLLLLLGAISAVIVVVKPWTIGVAFLLILLLIVLA
IGVIHHWASNNFYLTRTQMLFVCFLAFLLGLAAFLVGWFEGKPFVGASVGYFSFLFLLAG
RALTVLLSPPIVVYSPRVLPVYVYDAHADCGKNVSGAFLMLYGIALATEGWGVVASLNIY
PPFAGAAVSAITLVVSFGFAVSRPCLTLKMMEDAVQFLSKDMIVQAITRSATKTRNALSG
TYSAPQRSASSTALLVGDPTATRDKAGKLVLPRDDVMKLRDRLRNEELVVGSFLCRMRYQ
TFRHESVSGVDYRREMCAHARILALEEAIDTEWVYMWDRFGGYLLLLLGLTAQAERVQDE
VRLRLFLDSIGFSDLSAKKIKKWMPEDHRQFEIIQESYLREKEMEEEILMQRREEEGRGK
ERRKALLEKEERKWKEIEASLISTIPNAGSREAAAMTAAVRAVGGDSVLSDSFARERVSS
IARRIRTAQLARRALQTGVTGAVCVLDDEPTTSGRHCGEIDSSVCQSRKVSFSIAVLIQP
ESGPVCLLGTEFQKKECWEILVAGAEQGIEAGQVGLRLITKGDRQTTVAKEWSISATSIA
DGRWHIVTMTVDADLGEATCYLDGGFDGFQTGLPLSVGSSIWEQGTEVWVGVRPPIDVDA
FGRSDSEGAESKMHIMDVFLWGRCLTEDEIASLHTAIGSTEFGMIDYPEDNWQWADSPPR
VDEWDSDPADVDLYDRDDVDWDGQYSSGRKRRSDREGVTIDVDSFARRFRKPRIETQEEI
NQRMLSVELAVKEALCARGEAHFTDQEFPPNDQSLYMDPRNPPSKLQVVSEWMRPVEIVK
ESHLDSHPCLFSGAANPSDVCQGHLGDCWFLSAVAVLTEVSRISEVIITPEYNEEGIYTV
RFCIQGDWVPVVVDDWIPCESPGKPAFATSQKGNELWVSILEKAYAKLHGSYEALEGGLV
QDALVDLTGGAGEEIDMRSAQAQIDLASGRLWSQLLRFKQEGFLLGAGSPSGSDVQVSSS
GIVQGHAYSLLQVREVDGHKLVQIRNPWANEVEWNGPWSDSSPEWTDRMKHKLKHVPQSK
DGIFWMSWQDFQIHFRSIYICRVYPTEMRYSVHGQWRGYSAGGCQDYASWNQNPQFRLRA
TGPDASLPIHVFITLTQGVSFSRTAAGFRNYQSSHDSMMFYIGMRILKTRGRRASYNIYL
HESVGGTDYVNSREISCEMVLDPDPKGYTIVPTTIHPGEEAPFVLSVFTKASVTLEAL
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgaccagcatgggattgtactggcctgtgctatttcagggacccttttcgcg
gttttgggttcagcttcgttctcgattctatgggcagtgaattggaggccatggaggatt
tatagctggatctttgccagaaaatggccacatatcttacaaggtcctcagctgggcata
ttgtgtcgttttctctctctatctgcatggatgattgttgtatctccagttctaatgctt
gtcatgtggggaagctggttaattgtagtattgaatcgggatataattggtctggctgta
atcatggctggaactgctcttctattggcattctattcaatcatgctctggtggagaaca
caatggcaaagttcaagagcagttgctattcttcttctgctggctgttgccttgctctgt
gcatacgaactatgtgctgtgtatgttactgctggtaaaaatgcatctgagcgatattca
ccctctggtttcttttttggtgtatcagcaattgctttggcaattaacatgctctttatt
tgccgaatggtctttaatgggaatggcttagatgtggatgagtatgtgcggagggcatac
aaatttgcttatagtgattgtatagaaatgggtccaattccttgctcaccagagccacct
gaacccaatgaattataccctcggcaatccagtagggcttcacatcttggacttctatac
tttggttcgcttgtggttctgcttgtgtattccattttatatggtttgacagcaacagaa
gcacgctggcttggattcattacatcagctgctgtcattattctcgattggaacatggga
gcatgcttgtatgggtttcagcttcttcaaagccgtgtggtggcactttttgttgcgggc
acatcccgagtttttcttttctgctttggggtgcattactggtacttgggccattgcatt
agttatgctattgtagcatctgttctgttaggtgctgctgtttctcgtcatttgtcagtc
acaaatcctttagctgctagaagagatgccttacagagcacagtgattcgccttagagag
ggttttcgcagaaaggaacagaacacttcatccagctcttctgaaggttgtggctcaagt
gtaaaacgtagtagtagtattgaagcaggtccacttggtaatattgttgactctggtaac
cagttggcagtgcagtgcacaactgattctagtaactggaataatgttctatgccgaaat
gctagttgtcatgaggggatcaacagtgataaaagcacagatagtggaaggccgagttta
gcattacatagcagttcttgtcgttcagttgtccaggagcctgaagctgggacatctggg
gataaaaaatttgatctgaatagttccccagtggtttgctctagcagtggtcttgatagc
caatgctgtgagtctagtgcatcgacttctgcaaatcaacaactgttagatttgaacctt
gctcttgcttttcaggaaaggttgaatgatccgaggattacctctatgctgaaaaagagg
gcaaggcaaggcaacagagaactggctactttacttcaggataaaggactggatcctaat
tttgccatgatgttgaaggagaagaacttggaccacactattctggcattactccagagg
aacagtttggatgcagatagagatcatcgtgacaatattgacatcacaattgttgactca
aatagtgttgacaatgttatgcccaatcaaatttctctttcagaagaactaaggcttcag
gggcgtgaaaagtggcttcaattgtctagatttgttctgcatcacatagcaggtactcct
gagcgagcatgggttctctttagtttcatcttcattgtggaaacgactattctggcaatt
gttcggcccaagataataaaaattataaatactacacatcaacagtttgagcttggcatt
gcagtatttcttctatctcttgttgtttgctcaatcatgactttccttcggtcacttcaa
gtagaagaaatggccatgacatcaaaacctcgcaagtatggtgttattgcttggctgctc
agcactggtgttggattgttgctttccttcttgagcaaatcatcactgcttcttggattg
tccttgactgtcccactcatggtggcttgtctttctgttgccattcctatttggattcac
aatggctaccagttttgggttcatcaagtgcagtctgcaggtcatactgaaaaccatcgt
cctcctgggacaaaggagggtattgttcttattatttgtacaatagtatttattggatct
gtgttagctctgggtggaattgtgtctgcaaagcctctggatgatttaggatacagggca
ttgaccagtggccaaaaaagcttttgttctccttatgcatcaccagcataccttggttgg
gtgatggcatctgcaattgccttaatagtcactggtgtgttaccaattatttcatggttt
gctacatatcggttttccctgtcttctgctgtatgtgttgggatatttgcagttgttctc
gtggcattttgtggcacatcctatttggaagtagtccaatccagggatgaccaggttcca
acaaagggtgattttcttgcggccctacttcctcttgtgtgcattccagcattgctatca
ctttgctgtggattgcttaaatggaaagatgatgactggaaactttctcgaggtgtatat
atatttgttattattggtcttctgctgctgcttggtgcaatatctgctgttatagttgtg
gttaagccatggactataggggtggcattcctcttaattcttctcctgatcgtactagct
attggtgttatccatcactgggcttcaaacaatttctatttgaccaggacacagatgctc
tttgtttgtttcctcgcttttcttttgggcttggctgcatttcttgttggatggtttgaa
ggcaagccttttgtgggagcatctgttggttatttttcatttctgtttcttcttgctgga
cgagcattgactgtccttctgtcaccacccattgtagtttattcaccacgagtactgcct
gtttatgtttatgatgcccatgcagattgtggaaagaatgtcagcggtgcatttctcatg
ctttatgggattgctttggcaaccgaaggatggggtgttgttgccagtttgaatatttat
ccaccatttgctggtgctgctgtatctgcaattactcttgttgtatcctttgggtttgca
gtctctcgtccatgcctgactctaaagatgatggaagatgcagttcaatttctcagcaag
gatatgattgttcaagcaattacacgatctgccactaagacaagaaatgctttgtccgga
acatattcagctcctcaacggtctgctagttcaactgctcttttggttggggaccctact
gctacacgtgataaggcaggaaaacttgtgcttcctagagatgatgtcatgaaattgcga
gatcgtctaagaaatgaggaattagtagtaggatctttcctctgcaggatgagataccag
acatttcgccatgaatcagtcagtggtgtagattacagaagggaaatgtgtgcacatgct
cggattttggctttagaagaggcaattgatactgaatgggtgtacatgtgggatagattt
ggtggttacctgcttcttctgcttggcttgactgctcaggcagaaagagtacaggatgag
gtacgcttgaggctttttcttgacagcataggtttctctgacctaagtgccaagaaaatt
aaaaagtggatgccagaggaccataggcaatttgaaattattcaggagagctatctgaga
gaaaaggagatggaagaggaaatcttaatgcaaagacgtgaagaggaggggagaggtaaa
gaaagaaggaaggcccttttggagaaggaagagcgcaaatggaaggagattgaagcttct
ctcatttccactattcctaatgctggcagcagggaggcagcagctatgacagctgcagtg
cgtgctgtgggaggtgattctgttctcagcgattcctttgcacgagaaagggtttcaagc
attgcacgtaggatacgcacagctcaattagctcgccgagcattgcagaccggagttaca
ggtgctgtatgtgttcttgatgatgaaccaaccacaagtggcaggcactgtggcgagatc
gattccagtgtatgtcaaagtcgaaaggtcagcttttccattgcagttttgatccaacct
gagtctggaccagtttgccttttgggcactgaatttcagaagaaagaatgctgggaaatt
ctggtggctggtgctgagcaaggtattgaggctggacaggttgggcttagattaattact
aaaggtgataggcagacaactgttgccaaggagtggagtatcagtgcaacaagtattgct
gatggaagatggcatattgtgacaatgacagttgatgctgatttgggtgaagcaacttgc
tatttggatggtggctttgatggcttccaaactgggctaccattgtctgtgggcagtagc
atctgggaacaggggacagaagtttgggtcggtgttaggccaccaatagatgtggatgca
tttggaagatcagatagcgaaggagctgagtctaagatgcatataatggatgttttctta
tggggaaggtgcttaactgaagatgagattgcctctcttcacactgctataggctcaacg
gagtttggtatgattgactaccctgaagataactggcaatgggcagattcaccccccaga
gttgatgagtgggatagtgatcctgcagatgtagatctttatgatagggatgatgtagac
tgggacgggcaatattcaagtgggaggaaaaggaggtcagatcgtgaaggagtgacgata
gatgttgattcttttgctaggaggtttaggaaacctaggatagaaacacaagaagaaatt
aatcaacggatgctttcagttgaattggctgttaaggaagccttgtgtgctagaggagaa
gcacattttactgaccaggagtttcctccaaatgatcaatcgttatacatggatcctaga
aatcccccttcaaagttgcaggttgtctctgagtggatgcggcctgtggaaatagtcaag
gaaagccatctagactcccacccgtgtttgttttctggggcagcaaatccctctgatgtt
tgtcagggtcatttaggtgattgttggtttctaagtgctgttgctgttctaacggaggta
tcacgaatatcagaagtgattattaccccagagtataatgaggaaggaatttacacagtt
cgcttttgtattcagggtgactgggtcccagtcgttgttgatgattggattccatgtgaa
tcaccaggtaaacccgcatttgctaccagccagaagggtaatgaactctgggtttctata
ttggagaaagcatacgccaaattgcatggttcttatgaggcactggaaggtgggcttgtt
caggatgctcttgtggatctcactggaggtgctggcgaggagattgacatgaggagtgct
caggcccagattgatcttgcaagtggtagactgtggtctcaattgttgcgctttaaacaa
gaaggctttctattgggtgcagggagtccatcaggttctgatgtccaggtttcctcaagt
ggtattgtgcagggccatgcgtactctttgctgcaggtaagagaggtggatggccataag
cttgttcaaattcgaaatccatgggctaatgaagttgagtggaatggaccttggtctgac
tcatctcctgaatggactgataggatgaagcacaaattaaagcatgttccacagtccaag
gatggtatattctggatgtcctggcaagactttcaaatccacttccggtcaatatatata
tgccgtgtctaccccactgagatgcggtattctgtccatggtcaatggcgaggctacagt
gctggtggatgccaagattatgcttcctggaatcaaaatccacagttccgattgagggcc
actggtccagatgcatcattaccaattcatgtgttcatcactttaactcagggtgtgagt
ttctctagaacagcagctggtttcagaaattaccaatctagtcatgattcaatgatgttc
tacattggaatgaggattctgaaaacacgtggtcgtcgtgcttcctacaacatttaccta
catgaatcagttggcgggacagattatgtcaattctcgagaaatatcgtgtgaaatggtt
ttggatcctgatccaaaaggttacacaatcgtacctacaactatacatcccggtgaagaa
gcaccatttgttctctctgttttcaccaaagcatcagttaccctggaagctttgtaa
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integrated database retrieval system
