KEGG   Populus trichocarpa (black cottonwood): 7487102
Entry
7487102           CDS       T01077                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7487102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7487102
   03041 Spliceosome [BR:pop03041]
    7487102
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     7487102
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     7487102
Spliceosome [BR:pop03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    7487102
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 CofB_pilin_dom
Other DBs
NCBI-GeneID: 7487102
NCBI-ProteinID: XP_002318570
UniProt: B9I2R7
LinkDB
Position
12:complement(6362232..6364466)
AA seq 255 aa
MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAF
DKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATERP
QRTFNNNYGSYGGGNYGGGYGTGGGYGYGTGGGYGTNDGGNHGGRNATYGGNDGNYAVQN
TFDGGAGGIAGGVGGSDSYVSTNADGGYDGNAGLGYGSGNQFGANDSSGGGLNPDDALDA
NYKDEDDAGDFAKRA
NT seq 768 nt   +upstreamnt  +downstreamnt
atggcgtttcttaccaaaatgggaaatatgctccggcagacggctagcaggcagatggct
tctgagatttctgcatctagaccatccatctatcaagcaatgagatgcatgtcatcttca
aaactttttgttggaggtatttctttccagacagatgacaacagtctgaaagaggctttt
gataaatatggcaatgttgttgaagcaagaatcattatggatcgtgaaactggtagatcc
agagggtttggatttgttacttacacttctagtgaggaggcctctagtgccatccaggcc
ctggatggacaggatcttcatggtcgccgtgttagggtgaattatgcaaccgaacggcca
cagcgtacctttaacaataattatggcagctatggtggtggaaattatggtggaggatat
ggcactggtggaggatatggatatggaactggtggaggatatggcacaaatgatggtggt
aaccatggtggaagaaatgcaacctatggtggtaatgatggtaattatgctgttcaaaac
acttttgatggaggtgctggtggcattgctggtggagttggaggcagtgatagttatgtt
agcaccaatgctgatggtggatatgatggaaatgctgggttggggtatggcagcggcaat
cagtttggtgccaatgacagtagtggtggtggtttaaacccagatgatgcattggatgca
aattacaaggacgaagatgatgctggcgactttgccaaaagggcatga

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