Populus trichocarpa (black cottonwood): 7487127
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Entry
7487127 CDS
T01077
Name
(RefSeq) SNAP25 homologous protein SNAP33 isoform X2
KO
K18211
synaptosomal-associated protein 25
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7487127
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
7487127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
7487127
NCBI-ProteinID:
XP_002317966
UniProt:
B9I2W3
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All DBs
Position
12:8552118..8555763
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AA seq
305 aa
AA seq
DB search
MFGSKKSPLKISEHNKADPECPAPSRSNHFESENAVGTKKSLKPPRKTSSEPNLTSPNFR
TNPFDNDEERGLSSSSTYSLALSTRHKYKNDFLDLGGLENQPVQELENYAVYKAEETTKA
VNGCLKIAEEMREGATTTLITLHQQGEQITKTHSVAVEIDHDLSRGEKLLGSLGGMFSKT
WKPKKNRAIRGPVITRDASPRRRGNHLEQREKLGLNLAPKERSSTKTPLPETANAFQKVE
FEKSKQDDALSDLSNVIGELKNMAVDMGAEFDRQVGALDHVQDDVDELNSRLGGANKRGL
HLLRK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaaagaaatctcccttgaagatttctgagcataacaaggctgaccctgaa
tgtcctgctccttctcggtcaaaccattttgaatctgagaatgcggtgggcaccaagaaa
tcccttaaaccaccaaggaaaacttcttctgaacccaatctaacttcacccaatttccgc
accaatcctttcgacaatgatgaagaaagagggttgtcttcttcatctacatattccctt
gctttatccacaagacataagtacaaaaatgatttccttgacttgggaggactagagaat
caaccagttcaagaattggagaattatgctgtttacaaggctgaggagactacaaaagca
gtaaatggctgcttgaagattgctgaagaaatgagagagggtgcaacgacaactttgatc
accttgcatcaacagggtgagcaaatcaccaagacccacagtgttgcggttgagatagat
catgatcttagtcggggtgagaagcttttgggaagtcttgggggcatgttctctaaaact
tggaagccgaagaagaatcgtgcaattagaggccctgttatcacaagagatgcttcacct
cgaaggaggggtaaccacttggagcagagggagaaattgggtttgaatcttgcacccaag
gaacggtcaagcacgaaaacaccccttccggagacagccaacgcatttcagaaagttgag
tttgagaagtcaaagcaagatgatgcactgtctgatttgagtaatgttataggagagttg
aagaatatggctgttgacatgggggctgaatttgacaggcaagtcggcgctctggatcac
gtccaggatgatgtggatgagctaaattcccgtcttgggggagcaaataaacgtggcctt
catttacttcgaaagtag
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