Populus trichocarpa (black cottonwood): 7487188
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Entry
7487188 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7487188
KO
K21437
ankyrin repeat domain-containing protein 13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7487188
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
7487188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANKRD13_C
Ank_5
Ank_2
Ank
Ank_4
ANC1_spectrin
Ank_3
Motif
Other DBs
NCBI-GeneID:
7487188
NCBI-ProteinID:
XP_002325341
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All DBs
Position
19:3168921..3173997
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AA seq
664 aa
AA seq
DB search
MEDFSKYAHSPAHLAVACRDYATLKGIISTLPRLAKAGEVSTEEESLAAEQQADAVSAVI
DRRDVPGRETPLHLAVRLRDPIAAEILMAAGADWSLQNENGWSALQEAVCTREESIAIVI
ARHYQPLAWAKWCRRLPRIVASAARIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRG
SNLRADMTLAGFDGFRIQRSDQTFLFLGEGYSSEDGNISLAPGSLVVLAHKEKEVTNALE
GAGAQPTEAEVAHEVALMSKTNMYRPGIDVTQAELIPNLNWRRQERTEMVGNWKAKVYDM
LHVMVSVKSRRVPGAMTDEELFAVDEEERLGNAAENDEFDDVLTAEERKQLESALRMGNS
DGLGDDEEPGVVDSQENGSGGVYENGESNGAVKEKKSWFGWKNKGSKNTNDDPEDSKILK
KFSNLAPEGGAQKSDDHQKSSESAREDTGDARKGKDKSSKKKKKKGPSSESKHESEYKKG
LRPVLWLTPDFPLKTEELLPLLDILANKVKAIRRLRELLTTKLPLGTFPVKVAIPIVPTV
RVLITFTKFEELQPSEEFSTPLSSPAHFQDAKSKESEGASSWISWMRGSRGGQSSDSDSH
RYKDEIDPFLIPSDYTWVDANAKKRRMKAKKARNKKHRRGYPASQAAARGEDGQAHHLSE
DAEE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttttccaagtatgcccatagccctgctcatttggcagttgcatgccgagat
tatgctactcttaagggaattatctcaactctcccacggcttgccaaggctggtgaagtt
agtaccgaagaagagtctcttgctgctgagcaacaggctgatgctgtctcggctgtcatt
gaccgcagggatgttcctggcagagagactcctttgcatctggctgtcaggttgcgggat
ccaatcgcagccgagattttaatggcggctggtgctgattggagtctgcagaatgagaat
ggctggagtgcacttcaagaagcggtttgcacgagagaggagtcaattgccattgtaatt
gctcggcactaccaacctcttgcttgggcaaaatggtgtcgtaggcttccgcgaattgtt
gcttcagcagctcgtattcgtgatttttacatggagatcacgtttcattttgagagttct
gtcatcccatttattggacgcattgccccatcagatacttaccgcatttggaagcgtggt
tctaacctccgcgctgatatgactctcgccggctttgatggttttcgcattcagaggtca
gatcaaacatttctttttcttggggagggatactcctcagaggatggcaacatatctttg
gcaccaggttctttggttgttcttgctcataaagaaaaagaggtgacaaatgctttggag
ggggctggcgcccaaccaactgaagcggaagttgcacatgaagtggctttgatgtctaaa
actaatatgtataggccaggcattgacgtcactcaggcagagcttattccaaacttgaat
tggagacggcaagagaggactgaaatggttggaaattggaaggccaaagtctatgacatg
cttcatgtgatggtcagtgtaaagtcaagacgggttcctggtgctatgactgatgaggag
ctttttgcagtggatgaggaagagagattaggaaatgctgctgaaaatgatgagtttgat
gacgtgttgactgctgaggagaggaaacagttagaatctgcacttcgtatggggaactct
gatggtcttggtgatgatgaggaacctggtgttgttgatagccaagaaaatggctcagga
ggtgtatatgaaaatggtgaatctaatggtgctgttaaggagaagaagagttggtttggt
tggaagaataaaggttctaagaacactaatgatgatcctgaagattcgaagatcttgaaa
aaattttcaaatttggccccagaaggtggcgcccagaaatctgacgatcaccaaaaatca
tcagaatctgccagggaggatacgggggatgccaggaaaggaaaagataaaagcagcaag
aagaaaaagaagaaagggcccagtagtgaatctaagcatgagagtgagtacaagaagggt
ttgagacctgtcttgtggctcacaccagattttcctttgaaaaccgaggagctcctgcct
ttacttgacatattagccaataaagtcaaggctattaggagactcagagagcttttgaca
acaaagcttcctcttggaacatttcctgtcaaggtcgccatccctattgtcccaactgtc
cgggtgcttattacttttacaaaatttgaggagctacagccttcagaagaattctcaaca
cctctctccagcccagcgcatttccaagatgcaaagtccaaggaatctgagggggcttca
tcatggatttcatggatgagagggagtcgaggtgggcaatcaagtgacagtgatagtcac
cggtacaaggatgaaattgaccctttcctcataccatcagactatacttgggttgatgcc
aatgcgaagaaacgccgcatgaaagccaagaaagccaggaacaagaaacataggagaggt
tatcctgcatcacaggctgcagccagaggtgaggatgggcaggcgcatcatttgagtgaa
gatgcggaagaataa
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