Populus trichocarpa (black cottonwood): 7487296
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Entry
7487296 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7487296 isoform X1
KO
K21763
mitogen-activated protein kinase binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7487296
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
7487296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
WDR54
Motif
Other DBs
NCBI-GeneID:
7487296
NCBI-ProteinID:
XP_024459031
LinkDB
All DBs
Position
6:7333243..7343107
Genome browser
AA seq
1280 aa
AA seq
DB search
MKINNRKLKKSETSSSSKLVLEEIIGLTTKNANGLASNTSTARFAYIAGCVVVVYNVDST
TQSHLLVSHRPPKPLTCVAMSRDGRFIAAGESGNQPAVLVWDCSTMSFVSELKGHLYGVE
CIAFSPNGEHVVSVGGYIYLWDWRSGILVTKLKASSSCSAVTSVSFSSDAKFIVTAGKKH
LKFWTVGSSPGTRLSNGTGSLAMHGKPVNLGPQKGSSFISVTSAIGMNNSPDTPEQAGDL
FPIYVLTDEGTLCLVDSGLSVRKTVDLKVEQGYALSASDKLIACACCNGIVKLFTSETLN
HAGTLLYSNAKSFQGDTNFHFQTTEVQKDSQLVPALPDAIACQFSTSEKLVVVYGDHTLY
IWNIHDMKEATRCYALVSHSACIWDVKNLCCENMHDPSLACVARGCSGGVSFATCSADGT
IRLWDLTLQSNLVEDDADQQSLKAKQMGGTRLVSSGILERDTAEAGVDTQGFRSMAASSD
GKYLVAGDCEGNLHIYNLLTSDYACFQGIHDAEILSLSFSLSSKKHVISGDVVDSNCFLA
SGGRDRIIHLYDVERNFDLIGSIDDHSAAVTSVKLTFHGHKILSCSADRSLVFRDVCVVE
SCCKISRRHHQMASHGTVYDMALDPAMEFVVTVGQDKKINTFDIASGKLTRSFKQDKDFG
DPIKVSMDPSCSYLACSYSNKSLCMYDAISGELVTRAVGHGEVITGVIFLPDCKHVVSVG
GDSCIFVWKLPSRMSSRMLQRMKENAVPLSPKDLGPPSAFNQIVFSEAEDQQCTYNAEKI
LLPENSNQFGEKKFYQGERSPRISMFRFSVSRLPRWAQAKVEGSNSVSKNPDITSFQQQP
ELKTCPPDVDGGECGALCPEVQSPLGTVVGSRDSYISSLSGSSASENNQSSPTPLDTRSC
FAMDKRWLNVYTVCLDPLNSPEMPHLADPNMLVASPNSKIPSNGECSSAQANLAVKEERK
ASSKRHACSNNYGFLGKSENLSGIHSTSKCHKAVAGHVTEQLHSHKSGCQIQEAMEDEAD
HMKSEGSDFFKHYFGSLSTACKVDGSNPFVRRRYSAKYVVRQDYAGGGKSLFDTPVQNLH
SKISTYKAESVPHITLEDPMTQNPEEQKERESSKQDLKNSTQGLLISTHALSQGELTNCD
LAEDSLNMKLTEAMDQKERTPETEGNDLQQRLTACWEALINLDNAADNAVHLFSELGTMV
STEEISNSPGAKLYGDAGKLLPSIANKLNAIAELVQCRSHISCKSRVEVSGLEPLLGTFA
ESLSERVVEILKKNLTKSKD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaacaatcgcaaactcaagaaatcagaaacatcgtcatcttcaaagctggtt
ttggaagaaattattggattaacaacgaagaatgctaacggactagcttcaaatacatca
acggcaagatttgcttatattgcaggatgtgttgtggttgtttacaatgtggattcaact
actcaatcgcatctcttggtgtctcatagaccgcccaaacccttgacttgtgttgccatg
tcacgtgatggccggttcatagctgctggagagtctgggaatcaacctgcagtgttagtg
tgggactgttcgaccatgagttttgtatctgaactgaagggtcatctttatggagttgaa
tgtattgctttctcacccaacggagagcatgttgtttcggttggaggatacatatatctt
tgggattggagaagtgggattttggtgaccaagcttaaagcaagttcatcttgttctgct
gttacatctgtgagcttctcgtccgatgcgaaattcattgtaactgctggaaaaaagcac
ttgaaattctggacagttggatcttctccagggactcgcttaagtaatgggacaggatca
cttgcaatgcatggaaaacctgttaatcttggacctcagaaaggaagttcattcatttct
gtcacatctgcaatcgggatgaataatagtcctgacacacctgaacaagctggtgatttg
tttcccatttatgtgttgacggatgaaggtactttatgccttgtggattctgggctgtca
gtaagaaagacggtggacttaaaggtagaacaaggctatgcactatctgcatccgataag
ctcattgcttgtgcttgttgtaatggaattgtaaaactctttactagtgagacactcaat
catgccggaactctgctatattcaaatgccaaaagtttccagggggacactaattttcat
tttcagactacagaagttcaaaaggattctcaacttgtgcctgctctgcctgatgcaatt
gcttgtcaattctctacctcagaaaagttggtggttgtttatggagatcatactctctat
atatggaatattcatgatatgaaagaggcaacgaggtgctatgcattagtttcacactct
gcatgcatttgggatgtcaagaatctttgttgtgaaaacatgcacgatccatctctagca
tgtgttgcaagaggttgttctggtggagtttcatttgcaacatgctcggcagatggtact
attaggttgtgggatcttactttgcaatccaatttggtagaggatgatgcagatcaacaa
tccttgaaggccaaacaaatgggcggcacacgtttagtaagttctgggattttggagcga
gacactgcagaggcaggagttgacactcaagggtttcggtcaatggctgctagttcagat
ggaaagtacctggttgctggtgattgcgagggaaatcttcacatatataacctactaact
tctgattatgcatgttttcagggcattcatgacgcagagatcctctcattgagcttcagc
ttgtcaagcaagaaacatgttatttctggagatgtggtggatagcaattgcttcctcgca
tcaggggggcgagatcgaattatccatctttatgatgtcgaaaggaattttgatctcatt
ggaagtattgatgaccattcagccgccgtcacttctgtaaaactcactttccatggtcat
aagattctcagttgcagtgctgataggtcactagtgttccgagatgtttgtgttgtagag
agctgttgtaagatctctcgacgtcatcatcaaatggcgtctcatggaaccgtgtatgac
atggctttggatccagcaatggagtttgttgttacagttgggcaggataagaagataaac
acattcgacattgcttctgggaagctaactagatcattcaagcaggataaagattttgga
gacccaataaaggtctcaatggacccaagctgcagttatttggcatgctcctactctaac
aagtctttgtgcatgtatgatgcaatcagtggagagttggtcacacgagctgtgggacat
ggtgaagtaataactggtgtgatctttttgcctgactgcaagcatgtggtatctgttggg
ggcgatagttgtatttttgtgtggaaactaccgagtcgtatgtcttccaggatgctgcag
cgaatgaaggaaaatgctgttcccttgtccccaaaagacctgggcccaccatctgctttt
aatcaaatcgtgttttctgaagcagaagaccagcagtgcacatacaatgctgaaaaaata
cttttgcctgaaaactccaaccaatttggagaaaaaaagttttatcaaggagagcggtct
ccacggatctcaatgtttagatttagcgtttcgagacttccaagatgggcacaagctaaa
gttgaaggctctaatagtgtttcaaaaaatccagatatcacttcatttcagcagcaacca
gaactaaaaacttgccctccggatgttgacggtggggaatgtggtgcattgtgcccagaa
gttcaaagtccactcggtactgttgtgggaagcagggattcatacatcagtagcttatct
ggaagttctgctagtgaaaacaaccaaagctcaccaacgcctctagatactcgtagttgc
tttgccatggacaaacgttggctcaacgtttatactgtatgtttggatccactcaattct
ccggagatgcctcatttagcagatccgaacatgttagttgcctcaccaaattcgaaaata
ccaagtaatggtgagtgctcttccgcgcaagctaaccttgctgtaaaagaagagcgcaaa
gctagttcaaaaagacatgcctgttccaataattatggctttcttgggaaaagtgaaaat
ttatctggcatccacagtacaagtaaatgccataaggcagttgctggtcatgtgacagag
cagttgcattcacataaatcgggatgccaaattcaagaagcaatggaagacgaagctgat
catatgaagtcagaaggaagtgattttttcaagcattattttggcagtttatcaaccgca
tgcaaggtggacggaagtaacccttttgttcgaagaaggtactctgcaaaatatgtggtg
cgccaggactatgctggaggaggcaagagcctgtttgacacacctgttcaaaatcttcac
agtaaaatctcgacctacaaggcagaatctgtcccgcatattaccttggaggatccaatg
acccagaatccggaagaacagaaagagagagaatcttctaaacaggacctaaagaactca
acacagggcttgctgatctcaactcatgctctctcacaaggtgaattgactaactgcgat
ctcgcagaagattctttaaacatgaaattaacagaggccatggatcaaaaggaacgcact
cctgaaactgaaggaaacgatctgcagcaaagactaactgcatgctgggaagcactaata
aatttggacaatgcagctgacaatgcagtccatttattttcagaattaggaactatggtc
tccacagaagaaatatcaaacagtcctggagctaagttatatggcgacgcaggtaagcta
cttccatcaatcgccaataagctcaatgcaattgctgaactggtgcaatgtaggagccac
atttcatgcaagagtagggttgaagtttcaggactggaacctttgttaggaacatttgct
gagagtctatccgaaagggtagtcgagatactgaagaagaacctaaccaagagcaaggat
taa
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