Populus trichocarpa (black cottonwood): 7487319
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Entry
7487319 CDS
T01077
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
7487319
04980 Cobalamin transport and metabolism
7487319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7487319
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
7487319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Motif
Other DBs
NCBI-GeneID:
7487319
NCBI-ProteinID:
XP_002308217
UniProt:
B9HCW4
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All DBs
Position
6:7668259..7673124
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCIIVLLFNVYLLVNYQHPDDKNQAYFPKFVVVFGLSVAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWIAVYIVDAVLVFFIIPFAMFYYEGDQDKSVA
KRIKSALLWVITTAIVCGLVLGILYGVIGKVDFTVRHLSSTTTTFPSTWDFSGSQPCIGS
GPHQCSAYLANASSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATEFGKKARELKKAADALHQEERSGSKGRKWRKNVKSVEKELLQL
EEDVKLLEEMYPQGEKAETAWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLVDPPLS
PFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQISF
VVLAGLTFVYYAAFGWRRKKRSGRFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaatttagcactggtaatcgtagctatagtagtatgcatcatcgtgctc
ttgttcaatgtctacctcctagtcaattaccagcatccggacgacaagaatcaagcttat
tttcccaaattcgttgtcgtttttggcctctccgttgccgctatctcgattttgatgtta
ccggctgacgtagccaaccggcaagcttgtcgtcacgcgatttataatggcgcgtgcaat
cttaccttgccaatgaaggatctgtggattgctgtatacattgttgatgctgtgcttgtt
tttttcattattccttttgcgatgttttactatgaaggggatcaggacaagagtgttgct
aaaagaattaaaagtgctttattgtgggttataacaacggcgattgtgtgtggtcttgtg
ctcggcattttatacggggttattggaaaagttgacttcactgttaggcatctctcttcg
accacaactacttttccgagtacttgggatttctctggcagtcaaccatgtattggaagt
ggcccacaccagtgctctgcatatcttgcaaatgcttcctcagagaaaacttggaccatg
cgcgccacatttccagaatatgttgttgctcttgctacaattgttggatctgtactcttt
gcgatatttggtggtgttgggattgcttgtttgccactgggacttatcttctctttcatc
aggcgtccaaaggctgttatcacgcggtcacagtatattaaggaagcaactgaatttggt
aaaaaagcgagagaactgaagaaagcagctgatgcactccatcaggaggaaagaagtggt
tccaagggtagaaaatggcgtaaaaatgtcaagtcagtagaaaaggaattgcttcagcta
gaagaagatgtaaagctgttagaagagatgtacccgcaaggggagaaggctgagacagcc
tgggctttgacggttcttggctacttggcaaaacttgtgttgggaatcttagggttgatt
gtttcggtggcttgggttgctcatattatcatatacctgttggttgatccaccactttct
cctttcctaaatgaggtcttcatcaagttggatgacatatggggtcttctgggtactgtg
gcgtttgctttcttctgcttctaccttctgcttgcagtcatagctggggcaatgatgctg
ggcctgagattagttttcattacgattcatcccatgaagtggggagccactctaatgaac
tcctttcttttcaatgtgggactcattctcctatgctccattagcgtgattcagttctgt
gccactgcatttggctactatgcccaagcaactgcagcccaagaaattttcggtcacaca
ttgcagtcactccgtggaattaaatatttgtacaagtataacgtgttccaaatatcattt
gttgttctggcgggtttgacttttgtttattatgctgcctttggatggagaagaaaaaag
cgtagtggcaggttccaactttcctcataa
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