Populus trichocarpa (black cottonwood): 7487330
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Entry
7487330 CDS
T01077
Name
(RefSeq) diaminopimelate epimerase, chloroplastic isoform X1
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00300
Lysine biosynthesis
pop00470
D-Amino acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
Module
pop_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
7487330
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
7487330
Enzymes [BR:
pop01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
7487330
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Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-GeneID:
7487330
NCBI-ProteinID:
XP_002308231
UniProt:
B9HCY9
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Position
6:7920398..7923408
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AA seq
366 aa
AA seq
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MADTIAAATVSLFLKPSTRHSQLFLTLTTSLPVLRFNSLKNPKFRPLVVSSSMSIDSAAA
PQETSSKSSSFLDHKEGSRFLHFVKYHGLGNDFIVLDNRDSSEPKIRPEQAVKLCDRNFG
IGADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGNGVRCFARFIAELENFHGKRQSFTVH
TGAGLIVPEIQEDGQVKVDMGEPVLKAANVPTKLASNKNDAVVKSELVVDGVTWNVTCVS
MGNPHCVTFGTKGGEDLQVDALNLAQIGPKFEHHDVFPARTNTEFVQVYSPSHLKMRVWE
RGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLEIEWREEDNHVYMTGPAEVVF
YGSVRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactattgcagccgccaccgtttccctctttctaaaaccctcaactcgccac
tcccaactctttctcactctcaccacttctcttcctgttcttcgattcaactctctaaag
aacccgaagttccggccattagtagtttcctcttcaatgagcatcgattcagcagcagcc
ccccaggaaacttcatcaaaatcatcctcctttcttgatcacaaagaaggcagcagattc
cttcactttgtcaaataccacggcctcggcaatgacttcattgtgttggataatagggac
tctagcgagcccaagataagaccagagcaagcagtgaagttatgtgataggaattttggg
attggggcagatggggtgatttttgctttgcctggggttaatggaactgattatacaatg
aggatatttaattctgatgggagcgagccggagatgtgtggcaatggggtgcggtgtttt
gccaggtttattgccgagttggaaaattttcatgggaagagacagagttttactgtgcat
actggtgctggtttgattgttcctgagattcaagaagatgggcaagttaaggttgatatg
ggggagccggtgcttaaagcagctaacgtgccaacgaaattggcttcgaataagaatgat
gctgttgttaagtcggaattggttgtggatggagtgacttggaatgtgacttgtgttagc
atgggaaatcctcattgtgtaactttcggcaccaaaggaggggaggatttgcaggttgat
gcattaaatctggctcaaatcggtcctaagtttgaacatcatgatgtgttcccagcacgg
actaacactgagtttgtgcaagtttattcaccttcacatctcaaaatgcgtgtctgggag
cgtggggcaggagcaacactggcctgtggaaccggcgcttgtgcaacagtggttgcagca
gttcttgagggtcgtgctgggaggaattgcacggttgatctacctggaggtccactggag
attgagtggagggaggaagacaaccatgtgtacatgactggcccagctgaagtggtgttt
tatggatcagttcgcctatga
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