Populus trichocarpa (black cottonwood): 7487347
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Entry
7487347 CDS
T01077
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7487347
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7487347
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box_5
LRR_8
DUF3284
F-box
Motif
Other DBs
NCBI-GeneID:
7487347
NCBI-ProteinID:
XP_002309168
UniProt:
B9HD86
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All DBs
Position
6:complement(8101169..8105146)
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AA seq
666 aa
AA seq
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MKIQKTSQTNANNFFDLLSEEIIFTILDFTNTNPFDRKSFSLVCKSFYITESKHRKNLKP
LRQEHLPRILNRYPNVNHLDLSLCLRLNNSSLTVISNICKDSLNSIDLSRSRSFSYNGLM
SLALNCKNLVSIDLSNATELRDAAAAAVAEAKNLERLWLVRCKLITDTGIGCIAVGCKKL
RLISLKWCIGVSDLGVGLIAVKCKEIRSLDLSYLPITNKCLPSILKLQYLEHIALEGCFG
IDDDSLAALKHGCKSLKALDMSSCQNISHVGLSSLTSGAEGLQQLTLGYGSPVTLALANS
LRSLSILQSVKLDGCPVTSAGLKAIGNWCISLSELSLSKCLGVTDEGLSSLVTKHKDLKK
LDITCCRKITDVSIAYITSSCTNLTSLRMESCTLVPSEAFVFIGQQCQFLEELDLTDNEI
DDKGLKSISKCSKLSSLKIGICLNISDKGLSHIGMKCSKLADLDLYRSAGITDLGILAIC
RGCSGLEMINMSYCMDITDSSLLALSKCSRLNTFESRGCPLITSSGLAAIAVGCKQLNKL
DIKKCHNIGDAVMLQLARFSQNLRQITLSYSSVTDVGLLALASISCLQSMTVLHLKGLTP
SGLSAALLACGGLTKVKLHVSFKSLLPQPLFEHLEARCCVFEWRDKEFQAELDPKCYKLQ
WEDIAQ
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacaaaaaacctcacaaacgaacgccaacaacttcttcgatctcttgtctgaa
gagattatttttaccatcttagacttcactaacacaaacccttttgacagaaagtctttt
tctttagtttgcaagtcattttacattacagaatcaaaacaccggaaaaatcttaaacct
ttaagacaagaacaccttccaagaattcttaacagatacccaaatgttaaccatcttgat
ctttctttgtgtctacgactaaataacagttctttgacagttatatcaaatatttgcaaa
gattcattgaattctattgatctttctaggtcaaggtccttttcttataatgggttgatg
agtttggctttgaattgtaagaatttggtgagtattgacttgtctaatgcgactgagttg
agagatgcggcggcggctgcggtggcggaggctaagaatttggagaggttgtggttggtg
aggtgcaagttgattactgataccggaattggatgtattgctgttggttgcaagaagttg
aggttgattagcttgaaatggtgcataggtgttagtgatttaggggttggtttaattgct
gttaagtgtaaagagattagaagtttggatctctcttacttgccgattacaaataaatgt
ttaccatccattttgaaactacaatatcttgaacatatagctctagaaggatgctttggt
attgatgacgatagccttgctgccctcaaacacggctgcaagtcgctgaaggcactcgac
atgtcaagttgtcagaacatcagtcatgttggcttatcttccttaacaagtggtgctgaa
ggtctacagcaacttaccttaggatatggctctcctgtcactctagctctggctaatagt
ttgagaagtctttccatattgcaatctgtcaagctagatggttgtcctgttacctctgct
ggattgaaagctattggaaattggtgcatatcactaagtgagctgagcttgagtaaatgt
ttaggagtgacggatgaaggtctctcttctcttgtaacaaagcacaaagacttgaagaag
ctagatataacatgttgtaggaagataactgatgtttctattgcctacatcacaagttca
tgcaccaatctcacttccctcagaatggagtcatgtaccttagttcctagtgaagcattc
gtctttattggacagcaatgtcagtttcttgaagagcttgacttaacagataatgagatt
gatgacaaaggtctgaagtccatttccaaatgttctaaactctcgagcttaaagatagga
atttgcctaaacataagtgacaagggactctcacatataggcatgaagtgctcaaaactt
gccgatcttgatttgtacaggtctgctggaataacagatttgggcattctcgcaatctgt
cgaggttgctctggtcttgagatgataaatatgtcatattgtatggacattactgatagt
tccttattagcactatcaaaatgctcaaggttaaacacatttgaaagtcgagggtgccct
cttatcacatcttcaggtcttgcagccattgctgtggggtgtaagcagctcaataagcta
gacataaagaagtgtcacaacattggtgatgctgtgatgcttcagcttgctcgcttttct
cagaacctcagacagattactttatcgtatagctcagttacagatgtggggctactggcc
cttgccagcatcagctgtttgcaaagcatgacagtcctgcacttgaagggcttgactcca
agtggattgtcagctgccttgttggcatgcggaggattaacaaaagtgaagctccatgta
tcttttaaatcgttgcttccacagcctctttttgaacatttggaagcacggtgttgtgtg
tttgagtggagagataaagagtttcaggctgaattagatccaaagtgctacaagttacag
tgggaagacatagctcaatag
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