Populus trichocarpa (black cottonwood): 7487401
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Entry
7487401 CDS
T01077
Name
(RefSeq) aspartic proteinase PCS1
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7487401
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A1: pepsin family
7487401
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Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
7487401
NCBI-ProteinID:
XP_002305886
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Position
4:7049360..7050978
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AA seq
446 aa
AA seq
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MASPPLFKETMLPLLLLFTSLFLSTQETELKNDSLSFSFPLTSLPRSPQTSPSFYSSFIS
QSKKTPALKSAASPYNYRSRFKYSMILLVSLPIGTPPQSQQMILDTGSQLSWIQCHKKVP
RKPPPSTVFDPSLSSSFSVLPCNHPLCKPRIPDFTLPTSCDLNRLCHYSYFYADGTLAEG
NLVREKITFSTSQSTPPLILGCAEDASDDKGILGMNLGRLSFASQAKITKFSYCVPTRQV
RPGFTPTGSFYLGENPNSAGFQYISLLTFSQSQRMPNLDPLAHTVALQGIRIGNKKLNIP
VSAFRADPSGAGQSMIDSGSEFTYLVDVAYNKVREEVVRLAGPRLKKGYVYSGVSDMCFD
GNAMEIGRLIGNMVFEFDKGVEIVIEKGRVLADVGGGVHCVGIGRSEMLGAASNIIGNFH
QQNLWVEFDIANRRVGFGKADCSRSV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctcctcttttcaaagaaaccatgcttcccctcctccttctcttcacctct
ctcttcctctcaacccaagaaaccgaacttaaaaatgactctctttccttttctttccct
ctcacctccctccctcgttctccacaaacctctccaagtttctactcttctttcatctca
caatccaagaaaaccccagcactcaaaagtgcagcatcaccatataattacaggtcaaga
ttcaagtactcgatgatattactagtgtctctccctattgggacaccaccacaatctcag
caaatgattttggacacaggcagccagttgtcatggattcagtgccataaaaaggttcct
aggaaacccccacctagtactgtctttgatccttctttgtcttcttcattctcggtttta
ccatgtaatcatccactttgtaagcctagaatccctgactttaccctaccaacttcctgt
gacctgaatcgtctgtgccactattcttacttctatgctgatggaacattagctgagggt
aaccttgtaagagaaaagattacattttctacgtctcaaagtacccctcccttgatccta
ggttgtgccgaggatgcaagtgatgacaagggtatcttgggaatgaaccttgggaggctg
tccttcgcttcccaagctaaaataaccaagttctcgtattgtgtacccacccggcaagtt
cggcccggttttacaccaaccgggtcgttttacttgggtgaaaacccgaattcagctggg
tttcagtatattagtcttttgacattttcccaaagtcaacggatgcccaacttggaccct
ttggctcacactgtcgccttgcaaggaattaggattggcaacaaaaaattaaatatcccg
gtttcagccttccgggctgatcctagcggggcgggtcaatccatgattgactccgggtcc
gagttcacttacttggtggatgtggcttataataaggtgagggaggaagtagtgagacta
gcggggccaagactgaaaaagggctacgtgtatagtggtgtatccgacatgtgtttcgat
gggaatgcgatggagatcggacggttgataggcaatatggtgtttgagtttgacaagggt
gtggagatagtaattgagaaggggagggttttagcagatgttggtggtggggtccattgt
gttgggatcggacggtcagaaatgctgggcgctgctagcaatataataggaaattttcat
cagcaaaatctatgggtggagtttgatatagccaatcgtagagtgggctttggtaaggct
gattgtagcagatcagtgtaa
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