Populus trichocarpa (black cottonwood): 7487473
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Entry
7487473 CDS
T01077
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
7487473
04980 Cobalamin transport and metabolism
7487473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7487473
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
7487473
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
7487473
NCBI-ProteinID:
XP_002323579
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Position
16:complement(12036864..12041941)
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCIIVFLFNIYLLVNYQHPDDKNQAYFPKFVVVFGLFVAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWIAVYIVDAVLVFFIIPFAMFYYEGDQDKSVA
KRIKSALLWVITTAIVCGLVLGILYGLVGKVDFTVRHLSSTTTTFPSTWEFSRNQPCIGS
VARECSAYLANASSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATELGKKARELKKAADVLHQEERSGNKGRKWRKNVKAVEKELLQL
EEDVKLLEEVYPQGEKAETSWALTVLGYLAKLVLGILGLIVSVAWVAHIIIYLLIDPPLS
PFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIAF
VVLAGLTFVYYAAFGWRRKKPSGRFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagatttcaatttagcactagtaatcgtagctattgtagtatgcataatcgttttc
ttgttcaatatctaccttctagtcaattaccagcatcctgacgacaagaatcaagcttat
ttccccaaattcgtcgtcgtttttggcctcttcgttgccgctatctcgattttgatgtta
ccggctgacgtagcgaaccggcaagcgtgtcgtcatgcgatttataatggcgcgtgtaat
cttaccttgccaatgaaggatctgtggattgctgtatacattgttgatgctgtgcttgtt
tttttcatcattccattcgcgatgttttactacgaaggcgatcaggacaagagtgttgct
aaaaggattaaaagtgctttattgtgggttataacgacggcaattgtgtgtggtcttgtg
ctcggcattttatatgggcttgttggaaaggttgacttcactgttaggcatctctcttca
accacaactacttttccgagtacgtgggagttctctagaaatcaaccatgtattggaagt
gttgcacgcgagtgctctgcatatcttgcaaatgcttcctcagagaaaacatggacaatg
cgcgccacatttccagaatatgtggttgctctagctacaattgttggatctgttctcttt
gcgatttttggtggtgttgggattgcttgtttgccgttgggacttatcttttctttcatc
cggcgtcccaaggcagttatcactcgctcccagtatattaaggaggcaactgagcttggt
aaaaaagcaagagaactcaaaaaagcagctgatgtactccatcaggaggaaagaagtggc
aacaagggtagaaaatggcgtaaaaatgtcaaggcagtagaaaaggagttgcttcagctg
gaagaagatgtaaagctgctagaagaggtgtatcctcaaggggagaaggctgagacatcc
tgggctttgactgttcttggctacttggcaaaacttgtgttgggaatcttagggttgatt
gtttcagtggcttgggttgctcatattataatatatctgttgattgacccacctctttct
ccttttctaaatgaggtcttcatcaagttggatgatatatggggtcttcttggtactgtt
gcatttgctttcttctgcttctatcttctgcttgcagtcatagctggggcaatgatgctg
ggcctgagattggttttcattacaattcatcccatgaagtggggagccactctaatgaac
tccttccttttcaatgtgggactcattctcctatgctcaattagtgtgattcagttctgt
gccactgcatttggctactatgcacaagcaacagcagctcaagaaatttttggccacaca
ttgcagtcacttcgtggaattaaatatttgtacaagtataatgtgttccaaattgcattt
gttgttctagcgggtttgacttttgtgtattatgccgcctttggatggagaagaaagaag
cctagcggcaggttccaactttcctcgtga
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