Populus trichocarpa (black cottonwood): 7487515
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Entry
7487515 CDS
T01077
Name
(RefSeq) auxin response factor 6 isoform X1
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7487515
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
7487515
NCBI-ProteinID:
XP_024441918
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Position
1:37427494..37434844
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AA seq
898 aa
AA seq
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MRHSSAGFNPQTHEVEKRVLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKE
VNAQIPSYPSLPAQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRM
MFETEESSVRRYMGTITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLT
TFPTYPSPFPLRLKRPWPPGLPSFHGLGIKDDDLGKNPSLMWLRGDGDCGYQSLNFQGTG
VSPWVQPRVDASMLGLQNDVYQTMATAAFQEMRTLDPSKSSAASFLQFQQHQNLPTRSAA
LMQPRMLQQSPPQQTFFQGVQENKHQSQTPSQSHLIQQQLLHHHLLDSPQQQQQPFLQQQ
QLADQQIPNGVSAISQYASASQSLTPPLQAISLCQQHSYSDSNGNPATSPAVSSLQSLLD
SFPPNESSHLLSWPRINPLVTSSGWPSKRAAVESLTSSGAPQCMVTQVEQLGPLHTSITP
SSVSLPPFPGRECSIDRDGGTDQQNHLLFGVNIEPSSLLLQNGMSSLRGVGSDSDSTTIP
FSSNYISTAGTNFSLNPAMTPSSCIDDSCFLQSTENASQGNPPTRTFVKVYKSGSFGRSL
DITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDRENDVLLLGDGPWPEFVNSVW
YIKILSPQEVQQMGKRGLELLNSFPIQRLSNGSCDDYANRQDSKSSSTGITSVGSLDY
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaggcactcttcagctggttttaatccacaaacccacgaagtggaaaagcgggtgctg
aattctgaactatggcacgcatgtgcgggtcctcttgtttctcttcctgctgttggaagc
cgcgctgtttatttcccacaaggtcacagtgagcaggttgccgcatcaacgaacaaggaa
gtaaatgcccagattccaagctacccaagcttgcccgcacaacttatctgtcagcttcac
aatgtgaccatgcatgcagatgttgagacggatgaagtttatgcacaaatgaccttgcag
ccactaagtccgcaagagcaaaaggctgcctaccttccagcagatatgggcacccctagc
aaacagccaaccaattatttctgtaagactttgactgccagtgacacaagtactcacgga
ggattctctgtccctcggcgggcagccgagaaagtgttcccaccattggatttttctcag
catcctccagctcaagagttgattgctagggatttgcatgataatgaatggaaattcaga
cacatatttcgcggccagccgaaaagacaccttcttacaactgggtggagtgtgttcgtg
agtgctaaaagacttgttgctggggattcagtgctttttatctggaatgaaaagaatcag
ctactacttggcattaggcgcgctactcgaccgcaaacagtgatgccttcatcagtctta
tcaagcgatagcatgcacttgggccttcttgctgctgcagctcatgcagctgcaacaaat
agccgttttaccatattttacaatccaagggctagtccatcagagttcgtcataccactg
gccaaatatcttaaagctgtttattatactcgtgtgtctgttggcatgcgctttaggatg
atgttcgaaacagaagaatcaagtgtccgtcgctacatgggtacaataactggcataagt
gacttggatgttgttaggtggccaaattcacaatggcgttcagtcaaggttggctgggat
gagtctacagatggggagaggcagccaagagtttctctttgggagattgaaccactaacc
actttccctacatatccatctccatttcccctaaggctcaagcggccatggccaccagga
ctaccctctttccatggtttaggcatcaaggatgatgatctaggaaagaacccgtccctt
atgtggctacgaggagatggagactgtggatatcaatctttgaactttcagggaactgga
gtttcaccatgggtgcagccaagagttgatgcttcaatgctaggtttgcaaaatgatgtc
taccaaactatggctactgctgcctttcaggaaatgaggactctagatccttccaaatca
tcagctgcatcctttttgcaattccagcaacaccagaatctcccaaccaggagtgctgct
ttaatgcagccacgtatgttgcagcagtctcctcctcaacagaccttttttcaaggtgtt
caagagaataaacatcagtctcagactccatcccagtcacaccttattcagcaacaactg
ctgcatcatcacttacttgacagtccacagcagcagcagcagccatttctgcaacaacag
caactggctgaccaacagatcccaaatggtgtctctgcaatatctcaatatgcttcagcc
tctcaatccctgacaccaccattgcaagctatttcactgtgccagcagcacagctattct
gactcaaatgggaaccctgcgacgagccctgctgtttcttccctgcaaagtcttttggac
tcttttcccccgaatgaatcatctcatttgctaagttggcctagaataaatcccttggta
acttcatctggctggccctcaaagcgagctgctgttgaatctcttacttcctctggagct
cctcaatgcatggtgacccaagtggagcagctggggccacttcacacaagcatcactcct
agctctgtttctttgccaccctttcctggaagagaatgttcaatagaccgggatggtggc
actgatcaacaaaaccatcttctattcggtgtcaacatagagccatcatctcttctactg
cagaatggaatgtcaagtctcaggggagttggaagtgatagtgattccacaactatacct
ttctcttctaattacataagtactgcaggcaccaatttctcgcttaatccagcaatgaca
ccttcaagttgcattgatgattcatgtttcctgcaatccacagaaaatgcgagccaagga
aatccaccaaccagaacctttgttaaggtttacaagtcagggtcctttggtaggtcactg
gatatcaccaaattcagcagctacaatgagttgcgcagtgagctttctcgcatgtttggc
ctcgaaggccaactggaggaccccctgagatcaggctggcagcttgtattcatcgaccgg
gagaatgatgttcttctccttggtgatggcccctggccggaatttgtaaacagtgtgtgg
tacatcaaaatactctcaccacaagaagtacagcaaatgggaaaacgaggtttagagctt
ctgaactcttttccaattcagaggctttccaatggcagctgtgatgactatgcaaaccgg
caggattcaaaatcttcgagcactggtataacttctgtggggtctttggactactga
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