KEGG   Populus trichocarpa (black cottonwood): 7487576
Entry
7487576           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABA1f
  KO
K07904  Ras-related protein Rab-11A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7487576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7487576
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7487576
   04031 GTP-binding proteins [BR:pop04031]
    7487576
Membrane trafficking [BR:pop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    7487576
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7487576
  Exosomal proteins of colorectal cancer cells
   7487576
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    7487576
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 Gtr1_RagA AAA_16 ABC_tran AAA_14 TniB AAA_24
Other DBs
NCBI-GeneID: 7487576
NCBI-ProteinID: XP_002300408
UniProt: A9P9U7
LinkDB
Position
1:complement(39217324..39220106)
AA seq 215 aa
MSAYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDK
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV
IMFVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSR
KALDIGDDPAALPKGETINVKDDVSAVKKVGCCSV
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagtgcgtacagagcagatgaagattacgactatctgttcaagttggtgttaattgga
gactctggagttgggaaatcgaatctcttatctcgattcacgagaaacgaattcaacctg
gaatccaaatccactattggtgtcgaattcgctactcgtagcatccgtgttgatgacaag
attgtcaaagcccagatttgggacactgctggtcaagaaagataccgggcaatcacaagc
gcatactaccgaggagctgtcggtgcattgcttgtttatgacgtcactagacatgtcacg
tttgaaaatgttgagagatggctaaaggagctgagagatcacacagatgctaatattgtg
attatgtttgttggtaacaaggcagacctgcgtcatctgcgtgcggtttctactgaagat
gccaaggcctttgctgagagggagaacacatactttatggagacatctgctcttgagtct
ctgaatgttgaaaatgctttcactgaagtgctaacccaaatatatcatgtggtcagccgc
aaagcacttgacataggagatgatccagcagccttgcccaaaggagaaaccatcaatgtt
aaggatgatgtttcagcagtcaagaaagttggttgctgctctgtttaa

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