KEGG   Populus trichocarpa (black cottonwood): 7487689
Entry
7487689           CDS       T01077                                 
Name
(RefSeq) myosin-9
  KO
K10357  myosin V
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    7487689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7487689
   04131 Membrane trafficking [BR:pop04131]
    7487689
   03029 Mitochondrial biogenesis [BR:pop03029]
    7487689
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7487689
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     7487689
   mRNA cycle factors
    P-body specific factors
     7487689
Membrane trafficking [BR:pop04131]
 Others
  Actin-binding proteins
   Myosins
    7487689
Mitochondrial biogenesis [BR:pop03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    7487689
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     7487689
SSDB
Motif
Pfam: Myosin_head DIL Myosin_N IQ nSTAND3 AAA_16 DUF1131 AAA_22 DUF1664 Fez1 CbiA
Other DBs
NCBI-GeneID: 7487689
NCBI-ProteinID: XP_024439194
LinkDB
Position
13:3042259..3054863
AA seq 1528 aa
MGSTENIIVGSEVWVEDPQLAWLDGKVSKITGQDAEIETSNGKKVTAKLSKIYPKDMEAP
AGGVDDMTKLSYLHEPGVLENLKTRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQY
KGAPFGELSPHVFAVADVAYREMINERKSNSILVSGESGAGKTETTKMLMRYLAFLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQVSSPERNYHCFYLLCAAPQEEVEKYKLGSPKSFHYLNQTNCFELAGVSDAHDYL
STRRAMDIVGISAKEQEAIFRVVAAVLHIGNIDFSKGKEVDSSVPKDDQAKFHLKTTAEL
LMCDPVALEDALCKRVMITPEEVIKRSLDPQSAVTSRDGLAKTIYSRLFDWIVDKINNSI
GQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLLEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKVHKRFIKPKL
SRTDFTIAHYAGEVQYQSDHFLDKNKDYVVPEHQDLLNGSKCPFVAGLFPRLPEETSKSS
KFSSIGSRFKIQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENINIMQQLRCGGVLEAI
RISMAGYPTRRPFFEFINRFGLLAPEAWEGSYDEKTVCKKILEKKGLKGFQIGKTKVFLR
AGQMAELDARRAEVLNNAAKTIQGRIRTHYARKQFIALRKATIVVQSLWRGRLACKVYER
IKREAAARKIQKHIRRYAARTAYKKLHISALLLQTGLRAMVARKEFRFRKRTKAATIIQA
RWHCHKAASYYKRLQRSAIVTQTGWRCRVARRELRLLKMAARDTGALREAKDKLEKHVEE
LTWRLQLEKRLRTDLEEAKAQEVVKFQNSLEEMKNKIEEANALIIKEREAAKKAIDDAPP
VIKETQVLVEDTKKIDSLTEEVENLKTTLDSEKQRADDTEKKYSEVKEISEERRKKLEET
EKKVQQLQESLQRLEEKLNNLESENKVLRQQALSMTPNKYLSGRSRSIMQRAESHIPVDA
ARASLDMQSPSMNHREHSEVDDKPQKSLNEKQQENQELLIRCVAQHLGFSGNRPIAACII
YKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASG
AAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGGINGGVDTLRQVEAKYPALLFK
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGARSVANAAAQQALIAHW
QGIVKSLGSFLNTLKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKA
GLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQL
YRISTMYWDDKYGTHSVSTDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKSM
EQIDIADIEPPPLIRENSGFSFLLPRCD
NT seq 4587 nt   +upstreamnt  +downstreamnt
atgggaagtacggagaatataattgtaggttctgaagtttgggttgaagaccctcagttg
gcttggcttgatggaaaggtatcaaagattacagggcaggatgcggagatcgagacttca
aacggaaagaaggtcactgctaaattatcaaaaatatatccgaaggatatggaagctcct
gctggtggagttgatgacatgacaaagctttcttacttgcatgagcctggagttctggag
aatttgaaaacgagatacgaactgaatgagatctatacgtataccggaaatattcttatt
gccattaatccatttcaaagactgcctcatctctatgatggccacatgatgcaacaatac
aagggagcaccatttggagagctgagtcctcatgtttttgcggttgctgatgttgcatac
agggaaatgatcaatgaaaggaaaagtaattccattttggtcagtggtgaaagtggtgca
ggtaaaactgagaccacgaaaatgcttatgaggtaccttgcatttttaggaggtcgagct
gccacggaaggacgaaccgttgaacaacaagttcttgaatcaaacccagtccttgaagca
ttcgggaatgctaaaactgttagaaataacaattccagccgttttggtaaatttgttgag
atccagtttgacaagcatggaagaatttctggagctgccatcagaacttaccttttagag
agatctcgtgtttgccaagtttccagtcctgagcgcaactaccactgtttttaccttctt
tgtgccgcaccacaggaggaagtagagaagtacaagttggggagcccaaaatcattccac
tatcttaaccagacaaattgctttgaactggctggtgtaagtgatgcccatgactatctt
tccactagaagagctatggatattgttggaataagtgcgaaggagcaggaagcaattttc
agagtcgttgctgcagtccttcatattggaaatattgatttttccaagggaaaggaagtt
gattcatccgttcctaaagatgaccaagctaaattccatctcaaaacaacagcagagcta
ctaatgtgtgatcctgtagccctggaagatgcattatgtaagcgtgttatgatcacccct
gaggaggtcatcaagagaagtcttgatcctcaaagtgcagtcactagcagggatggttta
gctaagacgatttattctcgtttatttgattggatagtagataagattaataactccatt
ggacaagatcctaactcaaaatctctgattggagtccttgacatctacggttttgaaagc
tttaagacgaatagctttgagcagttctgcattaatttcacaaacgagaagttgcagcag
catttcaaccagcacgtcttcaaaatggaacaagaggaatacacaaaagagcagattgat
tggagctatattgagtttgttgataatcaagatgtcttggatcttcttgaaaagaaacca
ggaggtataatagctctccttgatgaagcttgcatgtttccaaagtcaacgcatgaaaca
ttttcaaataagctttatcagacatttaaagttcacaagcgttttatcaagccaaaactg
tctcgcacagatttcaccatcgctcattatgctggagaggtccagtatcaatcggaccat
tttttggacaagaacaaagactatgtggttcctgaacatcaagatttgttgaatggttcc
aaatgtcctttcgtagcaggcctgttccctcgacttccagaggagacaagtaaatcttca
aagttctcttcaattggttctcgtttcaagatacaactacagcaactaatggatacatta
aattctactgaacctcactacattagatgtgtaaagccaaacaatctactaaaacctgct
gtatttgagaatatcaacatcatgcagcaattgcgttgcggtggtgttttagaagcaatt
cgaataagtatggctggatatcctactcgccgccctttctttgaattcataaatcgattt
ggacttcttgccccagaggcttgggaaggaagctatgatgaaaagactgtttgcaaaaag
attttggaaaagaaggggcttaaagggttccagataggcaaaacaaaggttttcttgaga
gctggtcagatggctgaattggatgcaaggagagcagaggtactcaacaacgcagcaaaa
accatccagggacggatacggacgcattatgctcgcaaacagtttattgcattgcggaag
gctaccatagtggtgcaatcactatggagaggaaggctggcttgcaaagtttatgaaaga
ataaagagggaggcagctgctagaaaaattcagaagcatatacgtagatatgcagccaga
acagcctacaagaaacttcatatatctgcgcttctcttgcaaacaggtttaagggcaatg
gttgctcgcaaggaattcagatttaggaagcgaactaaagctgcaaccattattcaggcc
cgatggcactgtcataaagctgcttcctactataagaggctgcagagaagtgcaattgtc
acacaaacaggatggaggtgtagagttgctaggagagagctaaggttgctcaaaatggct
gcaagagacacaggtgcactacgagaagccaaagataagcttgaaaagcatgtagaggaa
ctcacatggcgtttgcagctggaaaaacgtttaaggaccgatttggaagaagcaaaagca
caagaagtggtgaaatttcagaattcactggaagaaatgaaaaacaaaatagaagaagcc
aatgcattgataatcaaggaaagggaggctgcaaagaaggctattgatgacgctcctcct
gtaattaaagaaactcaagtacttgttgaagatactaagaaaattgattctctaacagaa
gaagtagaaaacctaaagaccacgttagattctgagaaacaaagagctgatgatactgag
aagaaatacagtgaagtaaaagagattagtgaagaaaggcggaagaaattggaagaaaca
gagaagaaggttcaacaactccaggaatccttgcaaaggctagaagagaaacttaacaac
ctagagtcagagaataaagtcctgcggcaacaggctctgtcaatgacgcccaacaagtac
ctctcaggacgctccagatcaattatgcagagggctgagagtcacattccagtggatgct
gcaagagcaagtttggatatgcaaagcccttcaatgaatcacagggagcactctgaagta
gatgataagccacaaaagtcattaaatgagaaacaacaggagaaccaggagttgctcatt
cgttgtgttgcacaacacttgggattttcagggaacagacctatcgctgcgtgtatcata
tacaagtgccttttgcagtggagatcgtttgaagttgagagaaccagtgtgtttgatcgg
atcattcagaccataggccatgcaattgagacccaggataacaatgatgtcttggcctat
tggctatccaatgcctcaacactcctcttactgctccaacgtacattgaaagcaagtggt
gcagcaggaatggctccacaacgtcgacgatcatcatcagctactctatttggaagaatg
acacagagttttcgtggagctccacaaggagtcaatctatccttaatcaatgggggcatt
aatggtggagtggacaccttgcggcaagttgaagccaagtatccagctttgcttttcaag
cagcagcttacagcatatgtagaaaaaatttatggaatgattcgggataatctaaagaaa
gaaatctctcctttgcttggattgtgcatccaggcaccaagaacatccagagcaagttta
gtgaagggggcacgttcagttgccaatgctgcagcccagcaagccctgattgctcactgg
caaggaatagtgaagagccttggaagcttcttaaacactttgaagtcaaatcatgtgccg
ccatttttagttcgtaaggtgttcactcagatattttccttcatcaatgtccaactattc
aacagccttttattaagaagagaatgctgttcatttagtaatggtgaatatgttaaagct
gggttggcagaattggaacattggtgctacaaagctacggatgagtatgcaggttcagcc
tgggatgagctcaagcatattagacaggctatcgggtttctggtcattcatcaaaagcca
aagaaaacattggatgaaataagccatgacctgtgcccagttctaagtatccagcagcta
taccgaatcagtaccatgtactgggacgacaagtatggcacacatagtgtgtcgacggat
gttatatccaatatgagggtgttgatgacagaagattcaaataatgcagttagtaattct
ttcctgctggatgatgattcaagcattccattttcagttgatgacttatcaaagtccatg
gaacaaattgacatcgctgacatcgaaccaccacctctgattcgtgaaaactctggcttt
agtttcttgctgccacgctgtgattaa

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