Populus trichocarpa (black cottonwood): 7487689
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Entry
7487689 CDS
T01077
Name
(RefSeq) myosin-9
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
7487689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7487689
04131 Membrane trafficking [BR:
pop04131
]
7487689
03029 Mitochondrial biogenesis [BR:
pop03029
]
7487689
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7487689
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
7487689
mRNA cycle factors
P-body specific factors
7487689
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
7487689
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
7487689
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
7487689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
nSTAND3
AAA_16
DUF1131
AAA_22
DUF1664
Fez1
CbiA
Motif
Other DBs
NCBI-GeneID:
7487689
NCBI-ProteinID:
XP_024439194
LinkDB
All DBs
Position
13:3042259..3054863
Genome browser
AA seq
1528 aa
AA seq
DB search
MGSTENIIVGSEVWVEDPQLAWLDGKVSKITGQDAEIETSNGKKVTAKLSKIYPKDMEAP
AGGVDDMTKLSYLHEPGVLENLKTRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQY
KGAPFGELSPHVFAVADVAYREMINERKSNSILVSGESGAGKTETTKMLMRYLAFLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQVSSPERNYHCFYLLCAAPQEEVEKYKLGSPKSFHYLNQTNCFELAGVSDAHDYL
STRRAMDIVGISAKEQEAIFRVVAAVLHIGNIDFSKGKEVDSSVPKDDQAKFHLKTTAEL
LMCDPVALEDALCKRVMITPEEVIKRSLDPQSAVTSRDGLAKTIYSRLFDWIVDKINNSI
GQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLLEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKVHKRFIKPKL
SRTDFTIAHYAGEVQYQSDHFLDKNKDYVVPEHQDLLNGSKCPFVAGLFPRLPEETSKSS
KFSSIGSRFKIQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENINIMQQLRCGGVLEAI
RISMAGYPTRRPFFEFINRFGLLAPEAWEGSYDEKTVCKKILEKKGLKGFQIGKTKVFLR
AGQMAELDARRAEVLNNAAKTIQGRIRTHYARKQFIALRKATIVVQSLWRGRLACKVYER
IKREAAARKIQKHIRRYAARTAYKKLHISALLLQTGLRAMVARKEFRFRKRTKAATIIQA
RWHCHKAASYYKRLQRSAIVTQTGWRCRVARRELRLLKMAARDTGALREAKDKLEKHVEE
LTWRLQLEKRLRTDLEEAKAQEVVKFQNSLEEMKNKIEEANALIIKEREAAKKAIDDAPP
VIKETQVLVEDTKKIDSLTEEVENLKTTLDSEKQRADDTEKKYSEVKEISEERRKKLEET
EKKVQQLQESLQRLEEKLNNLESENKVLRQQALSMTPNKYLSGRSRSIMQRAESHIPVDA
ARASLDMQSPSMNHREHSEVDDKPQKSLNEKQQENQELLIRCVAQHLGFSGNRPIAACII
YKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASG
AAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGGINGGVDTLRQVEAKYPALLFK
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGARSVANAAAQQALIAHW
QGIVKSLGSFLNTLKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKA
GLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQL
YRISTMYWDDKYGTHSVSTDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKSM
EQIDIADIEPPPLIRENSGFSFLLPRCD
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtacggagaatataattgtaggttctgaagtttgggttgaagaccctcagttg
gcttggcttgatggaaaggtatcaaagattacagggcaggatgcggagatcgagacttca
aacggaaagaaggtcactgctaaattatcaaaaatatatccgaaggatatggaagctcct
gctggtggagttgatgacatgacaaagctttcttacttgcatgagcctggagttctggag
aatttgaaaacgagatacgaactgaatgagatctatacgtataccggaaatattcttatt
gccattaatccatttcaaagactgcctcatctctatgatggccacatgatgcaacaatac
aagggagcaccatttggagagctgagtcctcatgtttttgcggttgctgatgttgcatac
agggaaatgatcaatgaaaggaaaagtaattccattttggtcagtggtgaaagtggtgca
ggtaaaactgagaccacgaaaatgcttatgaggtaccttgcatttttaggaggtcgagct
gccacggaaggacgaaccgttgaacaacaagttcttgaatcaaacccagtccttgaagca
ttcgggaatgctaaaactgttagaaataacaattccagccgttttggtaaatttgttgag
atccagtttgacaagcatggaagaatttctggagctgccatcagaacttaccttttagag
agatctcgtgtttgccaagtttccagtcctgagcgcaactaccactgtttttaccttctt
tgtgccgcaccacaggaggaagtagagaagtacaagttggggagcccaaaatcattccac
tatcttaaccagacaaattgctttgaactggctggtgtaagtgatgcccatgactatctt
tccactagaagagctatggatattgttggaataagtgcgaaggagcaggaagcaattttc
agagtcgttgctgcagtccttcatattggaaatattgatttttccaagggaaaggaagtt
gattcatccgttcctaaagatgaccaagctaaattccatctcaaaacaacagcagagcta
ctaatgtgtgatcctgtagccctggaagatgcattatgtaagcgtgttatgatcacccct
gaggaggtcatcaagagaagtcttgatcctcaaagtgcagtcactagcagggatggttta
gctaagacgatttattctcgtttatttgattggatagtagataagattaataactccatt
ggacaagatcctaactcaaaatctctgattggagtccttgacatctacggttttgaaagc
tttaagacgaatagctttgagcagttctgcattaatttcacaaacgagaagttgcagcag
catttcaaccagcacgtcttcaaaatggaacaagaggaatacacaaaagagcagattgat
tggagctatattgagtttgttgataatcaagatgtcttggatcttcttgaaaagaaacca
ggaggtataatagctctccttgatgaagcttgcatgtttccaaagtcaacgcatgaaaca
ttttcaaataagctttatcagacatttaaagttcacaagcgttttatcaagccaaaactg
tctcgcacagatttcaccatcgctcattatgctggagaggtccagtatcaatcggaccat
tttttggacaagaacaaagactatgtggttcctgaacatcaagatttgttgaatggttcc
aaatgtcctttcgtagcaggcctgttccctcgacttccagaggagacaagtaaatcttca
aagttctcttcaattggttctcgtttcaagatacaactacagcaactaatggatacatta
aattctactgaacctcactacattagatgtgtaaagccaaacaatctactaaaacctgct
gtatttgagaatatcaacatcatgcagcaattgcgttgcggtggtgttttagaagcaatt
cgaataagtatggctggatatcctactcgccgccctttctttgaattcataaatcgattt
ggacttcttgccccagaggcttgggaaggaagctatgatgaaaagactgtttgcaaaaag
attttggaaaagaaggggcttaaagggttccagataggcaaaacaaaggttttcttgaga
gctggtcagatggctgaattggatgcaaggagagcagaggtactcaacaacgcagcaaaa
accatccagggacggatacggacgcattatgctcgcaaacagtttattgcattgcggaag
gctaccatagtggtgcaatcactatggagaggaaggctggcttgcaaagtttatgaaaga
ataaagagggaggcagctgctagaaaaattcagaagcatatacgtagatatgcagccaga
acagcctacaagaaacttcatatatctgcgcttctcttgcaaacaggtttaagggcaatg
gttgctcgcaaggaattcagatttaggaagcgaactaaagctgcaaccattattcaggcc
cgatggcactgtcataaagctgcttcctactataagaggctgcagagaagtgcaattgtc
acacaaacaggatggaggtgtagagttgctaggagagagctaaggttgctcaaaatggct
gcaagagacacaggtgcactacgagaagccaaagataagcttgaaaagcatgtagaggaa
ctcacatggcgtttgcagctggaaaaacgtttaaggaccgatttggaagaagcaaaagca
caagaagtggtgaaatttcagaattcactggaagaaatgaaaaacaaaatagaagaagcc
aatgcattgataatcaaggaaagggaggctgcaaagaaggctattgatgacgctcctcct
gtaattaaagaaactcaagtacttgttgaagatactaagaaaattgattctctaacagaa
gaagtagaaaacctaaagaccacgttagattctgagaaacaaagagctgatgatactgag
aagaaatacagtgaagtaaaagagattagtgaagaaaggcggaagaaattggaagaaaca
gagaagaaggttcaacaactccaggaatccttgcaaaggctagaagagaaacttaacaac
ctagagtcagagaataaagtcctgcggcaacaggctctgtcaatgacgcccaacaagtac
ctctcaggacgctccagatcaattatgcagagggctgagagtcacattccagtggatgct
gcaagagcaagtttggatatgcaaagcccttcaatgaatcacagggagcactctgaagta
gatgataagccacaaaagtcattaaatgagaaacaacaggagaaccaggagttgctcatt
cgttgtgttgcacaacacttgggattttcagggaacagacctatcgctgcgtgtatcata
tacaagtgccttttgcagtggagatcgtttgaagttgagagaaccagtgtgtttgatcgg
atcattcagaccataggccatgcaattgagacccaggataacaatgatgtcttggcctat
tggctatccaatgcctcaacactcctcttactgctccaacgtacattgaaagcaagtggt
gcagcaggaatggctccacaacgtcgacgatcatcatcagctactctatttggaagaatg
acacagagttttcgtggagctccacaaggagtcaatctatccttaatcaatgggggcatt
aatggtggagtggacaccttgcggcaagttgaagccaagtatccagctttgcttttcaag
cagcagcttacagcatatgtagaaaaaatttatggaatgattcgggataatctaaagaaa
gaaatctctcctttgcttggattgtgcatccaggcaccaagaacatccagagcaagttta
gtgaagggggcacgttcagttgccaatgctgcagcccagcaagccctgattgctcactgg
caaggaatagtgaagagccttggaagcttcttaaacactttgaagtcaaatcatgtgccg
ccatttttagttcgtaaggtgttcactcagatattttccttcatcaatgtccaactattc
aacagccttttattaagaagagaatgctgttcatttagtaatggtgaatatgttaaagct
gggttggcagaattggaacattggtgctacaaagctacggatgagtatgcaggttcagcc
tgggatgagctcaagcatattagacaggctatcgggtttctggtcattcatcaaaagcca
aagaaaacattggatgaaataagccatgacctgtgcccagttctaagtatccagcagcta
taccgaatcagtaccatgtactgggacgacaagtatggcacacatagtgtgtcgacggat
gttatatccaatatgagggtgttgatgacagaagattcaaataatgcagttagtaattct
ttcctgctggatgatgattcaagcattccattttcagttgatgacttatcaaagtccatg
gaacaaattgacatcgctgacatcgaaccaccacctctgattcgtgaaaactctggcttt
agtttcttgctgccacgctgtgattaa
DBGET
integrated database retrieval system