Populus trichocarpa (black cottonwood): 7487744
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Entry
7487744 CDS
T01077
Name
(RefSeq) conserved oligomeric Golgi complex subunit 4
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7487744
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
7487744
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG4_m
COG4_C
COG4_N
RINT1_TIP1
Sec10_HB
ZW10_C2
Sec15_C
DIL
Vps53_N
DUF4795
Motif
Other DBs
NCBI-GeneID:
7487744
NCBI-ProteinID:
XP_002302675
UniProt:
B9GRR3
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Position
2:complement(14103927..14107212)
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AA seq
763 aa
AA seq
DB search
MKMVATPNGAVTKSPKPQPQPLQEEPQQEDETTLNSPSIKFGTPEALDHVRNLTDVGAMT
RLLHECIAYQRGLDLNLDTLLSQRSDLDKNLHHLQKSADVLEIVKADFDHMHSNVRSTCD
LADHVSAKVRELDLAQSRVNSTLLRIDAIVERGNCIEGVKNALEKEDYESAAKYVQTFLQ
IDAKYKDSGSDQREQLLASKRTLEGIVGKKLSAAVDSRDHSTILRFIRLFSPLGLEEEGL
QVYVGYLKKVISMRSRLEFENLVELMEQSYNNSNVSSNVNFVGGLTNLFKDIVLAIEEND
EILRGLCGEDGIVYAICELQEECDSRGSLILKKYMEYRKLGKLASEINAQNKNLLAVGAP
EGPDPREIELYLEEILSLMQLGEDYTEFMVSKIKGLSSVDPELVPRATKSFRSGSFSRVV
QEITGFYVILEGFFMVENVRKAIKIDEHVPDSLTTSTVDDVFYVLQSCLRRAISTSNVNS
VIAVLSAAGSLLSNEYHEALQQKMRELNLGAKLFLGGVGVQKTGTEFATALNNMDVSGEY
VLKLKHEIEEQCAEAFPATADRERVKSCLSELGDVSSTFKQALNAGMEQLVATVTPRIRP
VLDSVATISYELSEAEYADNEVNDPWVQRLLHSVETNVSWLQPLMTANNYDSFVHLVIDF
IVKRLEVIMMQKRFSQLGGLQLDRDVRALVSHFSSMTQRTVRDKFARLTQMATILNLEKV
SEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggtagcaaccccaaatggagcagtcacgaaatccccaaaaccccaaccacaa
ccactacaagaagaaccccaacaagaagacgaaaccaccctcaactctccctctattaaa
ttcggcacccctgaagccttagaccacgttcgcaacctaaccgacgtaggcgccatgact
cgtctcctccacgaatgcatagcctaccaacgcggtctcgacctcaacctcgatactctt
ttatcccaacgttccgatctcgacaagaatctccatcacctccaaaaatccgctgatgtt
ctcgagattgtcaaggccgatttcgaccacatgcactccaatgtccgctccacctgcgat
ttagcagatcacgtgagtgccaaagtgcgtgagctcgatcttgctcagtcgcgtgttaat
tccaccctcttgcgtattgatgcgattgttgagagagggaattgtattgaaggagtgaag
aatgcgcttgaaaaagaggattatgagtctgctgccaagtatgtgcagacatttttgcag
attgatgcaaagtataaagattctgggtcggatcagagagagcagttgttggcgtcgaag
agaacgctcgaaggaattgtgggcaagaagttgtccgctgcggtggattccagggatcat
tcgacgattttaaggtttatcaggcttttttcgcctctaggattggaagaagagggcttg
caggtttatgttggatatttaaagaaagtgatttcgatgcgatctaggcttgagtttgag
aatttagtggagttaatggaacagagttataataatagtaatgttagtagtaatgttaat
tttgttgggggtttgacgaatttgtttaaggatattgttttggctattgaagaaaatgat
gagatattgaggggtttgtgtggtgaagatgggattgtttatgcaatttgcgaattacaa
gaggagtgtgattcgaggggttctttgattttgaagaaatatatggagtataggaaactg
gggaagttggcgtcggagattaatgcacagaataagaatttacttgctgttggtgcaccg
gaagggccagacccaagagagattgagttgtatttagaagagatattgtcattgatgcaa
ttaggtgaggattatacagaattcatggtttcgaagattaaagggttgagctctgttgat
cccgagttggttccacgagctactaaatcatttaggagtgggagttttagtagagtagtt
caggagatcactgggttttatgtgattttagagggattctttatggttgaaaatgtaagg
aaagctattaagattgatgagcatgtgcctgatagccttacaacgtctactgttgacgat
gtgttctatgttcttcaaagttgcttgagaagggcaatatcaacttcaaacgttaattct
gtgattgcagtcttgagtgctgcaggtagtttgttaagtaatgaataccatgaagctttg
caacagaaaatgagagaactaaaccttggtgcaaagctgtttttgggtggtgttggtgta
caaaagactgggactgagtttgccactgcattgaataatatggatgtgagtggcgagtat
gtcttgaagttgaagcatgagattgaagagcaatgtgctgaggcattccctgcaacagca
gatagagaaagggtgaaatcttgtttgtctgagttgggtgatgtgagcagtactttcaag
caagccctgaatgctggcatggaacaactagtggcaaccgttacacctcgaatccgtcca
gtattagatagtgtagcaaccatcagttatgaattatctgaggctgaatatgcagataat
gaggtgaatgacccatgggtccagaggcttctccactctgttgagacaaatgtatcgtgg
ctccagcctctaatgactgccaacaattatgattcatttgtacatttggtcattgacttc
attgtgaagaggctcgaagtgatcatgatgcagaagaggttcagtcagcttggaggcctt
cagcttgacagggatgtgagggcattggtaagccatttctctagcatgactcagaggact
gtgagagacaagtttgctcgtctcactcaaatggcaactattctcaacttagaaaaggta
tctgagattctagatttctggggtgagaactctggacctatgacctggagactaacccct
gcagaggttaggcgagtgttgggtctaagggttgattttaaacctgaagctattgctgct
ttgaagttgtga
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