Populus trichocarpa (black cottonwood): 7487745
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Entry
7487745 CDS
T01077
Name
(RefSeq) two-component response regulator-like PRR95 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7487745
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GFIT
Motif
Pfam:
Response_reg
CCT
AmiR_N
Motif
Other DBs
NCBI-GeneID:
7487745
NCBI-ProteinID:
XP_002301443
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Position
2:14117650..14123181
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AA seq
694 aa
AA seq
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MGKVVLSSSSEEAGGMVVELETEKKDIGSSEVVRWEKFLPKMVLRVLLVEADDSTRQIIV
ALLRKCGYRVSAVPDGLMAWETLKERPHSIDLILTEVELPLISGYAFLALVMEHDVCKNI
PVIMMSSHDSISVVLKCMLKGSADFLVKPVRKNELRNLWQHVWRRQTQTAGKIPRNSNRV
EASSENNAASSDFATSLQKNKDCSEKGSDAQSSCTTPCLEAESAHMQNIQGLSYLKYRSA
SNLSDADNEKYEDYAKLNKSPVNPESKTGVFVAERSNRTRPDREPYHGAYNPTASRLVEE
HACAKSAIHDENSRPENDREHANSSFGHDDVLAETSSGAIDLIGSFNNQPKHTYAYSSLH
DATNKFEFPPLLELSLRRLYPSSSKNQGLDERHALNHSNSSAFSLYNSKTLQSLFPTSAS
NGSDSKEEASKSPDPSSNQLAQNVGTLSQIHDASLSGNQEIMTTPVIGQSGKVELAHPSP
QLGLIPVLGTRLDNISTGCGHVFSPLCYTQSNAAWNPNLAGRQQSPFPTTASVHSNPEVL
DSKQNHKCYVDQNDLQQNNREPVDEMRHDSPAAGQSTSSSLCNRVANNNSSSAYESFGSG
NDVNASSVGTAEKSMAQENLNNGGNFNHDGFGGSDSYRSSQREAALTKFRLKRKDRCYEK
RVRYQSRKRLAEQRPRVKGQFVRQAQNDCPVANG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggtggtgttgagtagcagtagtgaagaggcgggggggatggtggtggagtta
gagacagagaagaaggatattggatcgtcggaggtggttcgatgggaaaagtttctacca
aagatggtgctcagggttcttttggtcgaagcggatgattctactcgtcagattattgtt
gctcttctccgaaaatgcggttacagagtttctgctgttcctgatggattaatggcgtgg
gagactttgaaggagagaccccatagcatagatctcatattaactgaagtggagttgcca
ttaatatcgggatatgcgtttcttgctttggtcatggagcatgatgtttgcaaaaacatt
cctgtcataatgatgtcttcacacgattcaattagtgtggttctgaagtgcatgttaaaa
ggatcagctgactttctcgttaagcctgttcggaagaatgaattgaggaacttgtggcag
catgtttggagaaggcaaactcaaactgctggaaaaatccctcgaaactcgaatagagtt
gaggcctcatctgaaaacaacgcagcttcgagtgattttgcgacgtctttgcagaaaaat
aaggattgcagcgagaaagggagtgatgcccaaagctcttgtacgaccccttgcttggaa
gctgagagtgctcacatgcaaaatatacagggactttcatatctgaagtataggagtgct
tcaaacttgagcgatgcagataatgagaagtatgaagattatgccaaattaaataaaagc
ccagtaaatcctgagagcaagaccggagtatttgtagcagaaaggtcaaacaggacgaga
cctgacagagaaccgtaccatggagcttataatccaactgcttcgagactggtagaggag
catgcttgtgctaagtcagcgattcatgatgagaactcgagaccagaaaatgatagggaa
catgctaatagctcctttggccacgatgatgtacttgctgaaacctcaagtggagccatt
gacttgattggttccttcaataatcaaccaaagcacacatatgcatactctagtttacat
gatgcgacaaacaagtttgaattccctccactacttgaactctctctcagaagattgtat
cccagtagctcaaagaaccaagggctagatgaaagacatgcattgaaccattccaattcc
tcagccttctcactgtacaatagtaagacactgcaatccctttttccaacatctgccagt
aatggctcagattccaaggaagaagccagtaagtctcctgatccgtcatccaatcaactt
gctcaaaatgttggtactctttctcagatacacgatgcctctttgagtggcaatcaagaa
attatgaccactccggtcattggccagtctgggaaggtggaattagcacatccaagccct
caacttggattgattcctgtcttaggtacaaggcttgacaatatctctaccggatgtggt
catgttttctcccctctatgttatacacaatcaaatgcagcatggaatcccaatcttgcg
gggcggcaacagtctccatttcctacaactgcctcagttcattcaaatcctgaagttctt
gattccaagcaaaaccacaagtgttatgttgaccaaaatgatcttcagcagaacaatagg
gaacctgtggatgaaatgagacatgattcacctgctgctggtcagagtactagtagtagt
ttatgtaaccgtgttgccaataataatagtagcagtgcttatgaaagctttggcagtgga
aacgatgtaaatgcctcttcggttgggacagctgagaagtccatggctcaagagaacttg
aataatgggggtaacttcaaccatgatggttttggagggagcgattcctatcgctccagc
caaagagaagctgctctaacaaagttccgcttgaagcggaaagatcgatgctatgagaaa
agggttcgataccaaagtcggaaaagactggcagagcaacgtcctcgggtgaaaggtcag
tttgttcgtcaagcgcaaaatgattgcccagttgctaatggttga
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