Populus trichocarpa (black cottonwood): 7487797
Help
Entry
7487797 CDS
T01077
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
7487797
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
7487797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
7487797
NCBI-ProteinID:
XP_002301486
LinkDB
All DBs
Position
2:complement(16646259..16650500)
Genome browser
AA seq
558 aa
AA seq
DB search
MYPTRGRTKHLLFLLPISILVITLLSFKRPAKFSSKTIEIPRLHIHKHIQIAHSACKGTL
YPELCVSTLVSLPDLASKSLQEFISATLNKTMDEVRASSADCNAIRNKMKLGPLEKVALK
DCIELFDDTIAELKSAISNLALRKPTSKHYHDLQTLLSGAMTNQYTCLDGFARSKGKVRK
AIKKGLYNISHHVSNSLAMLKKIPGVNASKSEVFPEYGNVKHGFPSWLSTKDRKLLQASA
NATKFDLIVAKDGTGNFTTISEAVRAAPNSSDTRFVIHIKAGAYFENVEVERKKKMLVFI
GDGIGKTVVKANRSVVDGWTTFRSATVAVVGDGFIAKGITFENSAGPSKHQAVALRSGSD
LSAFYQCSFVGYQDTLYVHTLRQFYRECDIYGTIDFIFGNAAVVFQNSNLYARKPNSNQK
NIFTAQGREDPNQNTGISILNCKVAAAADLIPVKSSFQTFLGRPWKEYSRTVFLRSYIDD
LVDPAGWLEWNASFALSTLYYREYMNRGPGSNTSARVTWPGYRIITNSTEASQFTVGAFI
QGNTWLNSTDIPYFLNLN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtatcccaccagaggaagaactaaacacttgctctttctcttgcccatttcaatcctt
gtcataactctactctcctttaaaagacctgctaaatttagctcaaaaaccatagaaatc
ccacgattacacatccacaaacacatccaaattgcccactcagcgtgtaaaggcacacta
taccctgaactttgcgtctcaactcttgtatctctcccagatctcgcctctaagtccctt
caagaatttatctctgcaaccttaaacaaaacaatggacgaggttagagcctcctccgca
gactgcaatgccatcagaaacaaaatgaagctaggaccacttgaaaaggtagctctcaaa
gactgtatcgagctcttcgatgacaccattgccgagctcaaatcagccatctctaacctt
gccctaagaaaaccaacctcaaagcattaccacgacttgcaaactttattaagtggtgcc
atgacgaaccagtacacgtgccttgatgggtttgctcgtagtaaaggaaaagttaggaaa
gcaatcaagaaaggcctgtataacatatctcaccatgtaagtaactccttagccatgctc
aagaaaatccctggcgttaacgcatctaagtccgaggttttccctgagtatggtaacgta
aaacatgggtttccatcttggttgtcaaccaaagatcgaaagctcttgcaggcttccgcc
aatgcaaccaaatttgatttaatagtagctaaagacggtacaggaaacttcactaccatt
agcgaagcagtgcgagcagctccaaactcaagcgatacaaggtttgtgatacatataaag
gccggggcatattttgagaacgtggaggtggagagaaagaagaagatgctagtgttcatt
ggggatggcattggaaagactgtggtcaaagcaaacaggagtgttgttgatggatggact
actttccggtcagccactgtcgcggtggtaggagacgggttcattgccaagggcataacc
ttcgaaaactcagcagggcctagtaaacaccaagcagtggccttaagaagtggctcggat
ctctctgcattttatcaatgcagctttgttggttaccaagacaccttatatgtccatacg
cttcgacaattttatcgcgagtgcgacatatatggcacgattgacttcatttttggtaat
gcagctgtggtatttcaaaacagcaacttgtatgctcgcaaaccaaattcaaaccaaaaa
aacatattcactgcccaaggtagagaagaccctaaccaaaacactggaatatcaatcctc
aactgcaaggttgctgctgctgctgatctaattccagttaaatcatcgttccaaacgttt
ttaggacggccatggaaagaatactcaaggacagtttttcttcgatcatatattgatgat
ctggtcgatcctgctggatggctggaatggaatgcatcgtttgcattgagtaccctttac
tatagggagtacatgaacagaggtccaggttcaaatacaagtgcaagggtgacatggcct
ggttacaggatcatcacaaattcaactgaggccagtcagtttacagtcggggcatttata
caaggaaatacctggttgaattctacagatattccatactttctcaatttgaattaa
DBGET
integrated database retrieval system