Populus trichocarpa (black cottonwood): 7487805
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Entry
7487805 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7487805
KO
K14801
pre-rRNA-processing protein TSR4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7487805
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
7487805
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GFIT
Motif
Pfam:
PDCD2_N
PDCD2_C
zf-MYND
Damicornin
Motif
Other DBs
NCBI-GeneID:
7487805
NCBI-ProteinID:
XP_024449925
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Position
2:16416378..16421636
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AA seq
412 aa
AA seq
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MSAKGDSTEKLKGVQISSLDEDDEVEEVVEEEEEEEEGDDSEEEEEPVTLGFLEKTKNCW
SLLRQVFPSKAGGVPAWLDPVNLPSGRSCVCDICEEPLQFLLQVYAPITEKESTFHRTLF
VFMCPSMSCLHRDQHEQWKRSPEKPSRSVKVFRCQLPCSNPFYSSEPPRNDGTDKPSGSG
VSLCNWCGTWKGDKVCSGCKRTKYCSHKHQVLHWHSGHKIDCQQLSLSVDSSSSKNGTTS
AEIIKVVSNALWPEYEMINDDENEYDAEMSDDNIPTHSLVSRNKMDSTMNSLLDIFEGNS
DKKCWASFQQRIAKAPEQVLRYCRNASAKPLWPLSSGQPSKADIPNCSYCGGPSDFEFQI
LPQLLYYFGVKNDADSLDWATIVVYTCKSSCEASMAYKEEFPWVQLYPTSAT
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaagggagactctacagaaaagctcaagggagtacagatttcctcgcttgat
gaagacgatgaggttgaagaagtcgttgaagaagaagaagaagaagaagaaggtgacgat
agtgaagaagaagaagaaccagtaacactaggtttcttggaaaagacaaagaattgttgg
tctcttttgcggcaagtatttcctagcaaggctggtggcgtgccggcatggctggatcct
gttaatttaccatctggaaggtcttgtgtttgtgatatatgtgaagaacctttacagttt
ttgcttcaggtatatgcaccaataacagagaaggaatcaacatttcatcgaacattgttt
gtgttcatgtgcccatcaatgtcctgtcttcatagagatcaacatgagcaatggaagcgc
agtccagaaaaaccatctcgaagtgtgaaggtttttcgttgtcaattaccttgctctaat
cctttttactcaagtgagcctccaagaaacgatggaactgataaaccgtctggatctggg
gtttcgctttgtaactggtgtggtacctggaaaggagataaagtttgtagtggttgcaaa
agaacaaaatactgctcccataaacaccaggttttgcactggcactcaggtcacaaaatt
gattgtcaacagttgagcctttcagttgactctagttccagtaagaatggaaccacttcg
gcagagatcattaaagttgttagcaatgccttgtggccagagtatgagatgataaatgat
gatgaaaatgaatatgatgctgaaatgtctgatgataacatacccactcattcactggtg
tctaggaacaaaatggacagcacaatgaattcgttgttggacatttttgagggcaatagt
gacaaaaagtgctgggcgtctttccaacagcgcatagccaaagcgcccgaacaagtgtta
aggtattgtaggaatgctagtgcaaaacccctatggcctctgtcaagtggtcagccatct
aaggctgacatccctaactgcagttactgtggtggtccttcagattttgagtttcagatc
ttacctcagctactttactacttcggtgtaaagaatgatgcggattctcttgattgggca
accattgttgtgtacacctgcaaatcctcttgtgaggcaagcatggcttacaaagaagaa
tttccctgggttcagctctacccaacatctgcaacttga
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