Populus trichocarpa (black cottonwood): 7487876
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Entry
7487876 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7487876 isoform X1
KO
K05289
GPI-anchor transamidase subunit GAA1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
7487876
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Gene cluster
GFIT
Motif
Pfam:
Gaa1
Motif
Other DBs
NCBI-GeneID:
7487876
NCBI-ProteinID:
XP_024449608
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Position
1:35617598..35621776
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AA seq
718 aa
AA seq
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MPKTETDTPKMKPRPIVRLGIFLISHSLLVSVVCCTAGVLALLLLPLLAKSTYISENALM
PGSASSMISNRDISEANRLASDLSGLNFEPQDAAALESRGILTKYMSDLGAEVSYHKFHH
KPNQFHPLHFFSSPDSTSSVKNFSCSAHGVNTVGIIRAPRGDGKEAIVLVTPYKFGKSGA
AETLSLSIAYTVFSLLSRVTWLAKDIIWFVADSQYGEYAPVEAWLRDYHTPVFTGLGTLN
ADTCVKIDDLYVFEQKSIAQRKISDGFRRAGTMAAALILKVADRNELLEDTLNIYAEASN
GQMPNLDLINIVNYLAVHRQGLRVKVEKVLTLLDLRWLEILGEMFELLGKVARSLNPGWK
FGISAADYIEGSATLASSLYYQALGIPTGPHGAFRDFQVDAITLEISPKVFPHNKARHNE
FLLRGGRLVEGVIRSINNLLEKFHQSFFLYMLTSPSKFVSVGVYMIAFALLVAPLPLVAA
SLYADANQLDLGVKNTKSTPTATASDELDITFRSWKWLYAAKEVFLIHVWGAAVSLLPYF
ICQIPNCSPTSSSVIWVFLSMLSLLILYLIVGSPSTHVSISQPEEKGEWAILKSATISAV
FIGLLVMSVVNFAAAEIGALLLVPMCLMAQPLKLDMKAGKLRSFLRIICNVVLGFVAFPP
AAFFVVKTIFEGFDSINMGDFWNWMESLWAWNSATYIYIGMVHLPCWVLCLHILLHSC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagacagagacggatacacctaaaatgaagccgagaccaatcgtgcgtctaggc
atcttcctcatctctcacagcctcctggttagtgttgtctgttgtacggctggggtttta
gctctcttgctgcttccacttctcgccaagagcacttacatttctgaaaatgctctcatg
ccaggttctgcaagcagtatgatctctaatcgtgacatttcagaggcaaataggttggca
agtgatttgagtggtttgaattttgaacctcaagatgctgccgccttggaaagtcgaggg
atccttacgaaatacatgtctgacttgggtgctgaagttagttatcacaagttccaccat
aagccaaatcagtttcatccgctgcatttcttctccagtcctgattctacaagttcagta
aagaattttagttgttcggcacacggtgtcaatactgttggaataattagagctcctcgc
ggtgatggtaaggaagctattgtcttggtgacaccttacaagtttggaaagagtggtgcg
gcagaaactttatccttgagcattgcatatacagtattttccttgctctctcgagttaca
tggctggccaaggacattatatggttcgttgctgactcacagtatggagaatatgccccc
gttgaagcttggctaagagattatcacacgcctgtatttactggtttgggcaccctaaat
gctgatacatgcgtcaaaattgatgatctctatgtatttgaacagaaatctattgcgcaa
agaaagatatctgatggttttagacgtgccgggactatggctgctgcactgatattaaag
gttgcagatagaaacgaactgttggaggacactcttaatatctatgctgaggcgtccaat
gggcagatgccaaacctggatctcatcaatattgtgaattatttagctgtacataggcaa
ggattgcgtgtaaaggttgagaaagttttgactctacttgatttgagatggcttgagatt
ttgggagaaatgtttgagttactaggaaaagtcgccagaagcttaaatcctggatggaaa
tttggtatttcagctgcagattatattgaaggcagtgctacacttgcaagttcattgtat
taccaggctttgggcattcccacaggtcctcatggtgctttccgtgatttccaagttgat
gcaattactttggagatttcacctaaggtttttcctcataacaaagccaggcacaatgag
tttcttctaagaggaggccggttggttgaaggagttataagatcaataaataatctcctc
gagaagtttcaccagtcatttttcctatacatgttaacatctcccagcaagtttgtgtca
gtcggagtgtacatgattgcttttgcactccttgtagcaccacttcccctggtagcagct
tcactttatgctgatgctaatcaactggatcttggtgtcaaaaataccaaatctactcct
acagccactgcttctgacgagcttgacatcactttcagatcatggaaatggctgtatgct
gcaaaagaagtttttctcattcatgtatggggtgcagctgtttcattgcttccatatttc
atttgtcagataccaaactgcagcccaacgtccagctctgttatctgggttttcctttca
atgcttagcctcctaatcttgtacttgatagtgggttctccatctactcacgtctctata
tctcaacctgaggagaagggcgaatgggctattttgaaatcagcgaccatctcagcagtc
ttcattggtttgcttgtcatgtcagttgttaattttgcagcagcagaaattggtgcgtta
cttttggtcccaatgtgtttgatggctcaacctttgaagcttgacatgaaagctgggaag
ttaaggagtttcttgaggattatttgtaatgtggttttgggttttgttgcatttccgcca
gctgctttttttgtggtgaagactatattcgaaggttttgacagcattaatatgggtgac
ttctggaattggatggagtccctttgggcatggaacagtgctacttacatttatataggt
atggtccatctgccatgttgggtgttgtgcttacacattttacttcattcttgttga
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