Populus trichocarpa (black cottonwood): 7487965
Help
Entry
7487965 CDS
T01077
Name
(RefSeq) protein FIZZY-RELATED 3 isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7487965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7487965
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
7487965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_RIG_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_SPT8
Aldo_ket_red
Motif
Other DBs
NCBI-GeneID:
7487965
NCBI-ProteinID:
XP_002312104
UniProt:
B9HMJ4
LinkDB
All DBs
Position
8:complement(3388011..3391275)
Genome browser
AA seq
485 aa
AA seq
DB search
MDSTPRRKSGLNLPSGMNETSLRLETFSSSSSFRAVTCVSSPRAISSLSSPSKTSSCSDR
FIPCRSSSRLHTFGLVEKGSPVKEGGNEAYARLLKSELFGSDFGSFSSPAGGQGGLSSPN
KNMLRFKTDHSGPNSPFSPSILGHDSGISSESSTPPKPPRKVPKTPHKVLDAPSLQDDFY
LNLVDWSSQNVLAVGLGTCVYLWTASNSKVTRLCDLGPNDSVCSVQWTREGSYISVGTHL
GQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRTLASGSRDRHILQHDLRISSDYVSKLIG
HKSEVCGLKWSHDDRELASGGNDNQLLVWNQHSQLPILKLTEHTAAVKAIAWSPHQSGLL
ASGGGTADRCIRFWNTTNGHQLNHVDTGSQVCNLAWSKNVNELVSTHGYSQNQIMVWKYP
SLSKVATLVGHSLRVLYLAMSPDGQTIVTGAGDETLRFWNVFPSMKTQTPVKDTGLWSLG
RTQIR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacaccaagaagaaagagtggcctgaacctcccatctgggatgaatgagact
tctttaagactagagaccttttcctcttccagttcttttagagcagtaacatgcgtatca
tcacccagagcaatatcaagcttatcttcaccctcgaaaacctcatcttgtagtgataga
ttcataccttgcagatcatcttcaaggctccacacttttggactcgtagagaaaggatct
cctgttaaagaaggaggcaacgaagcttatgcaaggttactgaaatctgagcttttcggg
tctgattttggttccttttcttctcctgcaggtggtcaaggaggattgagtagccctaac
aagaatatgttgaggttcaagactgatcattcggggcctaattcgccgttttctccttca
atcttgggacacgatagtgggatttctagtgagtcttctactcctcctaagccaccaaga
aaagtccccaaaacacctcataaggttttggatgccccgtcacttcaagacgacttctat
ctgaatcttgtggattggtcctcgcagaatgtactcgctgttgggttgggaacttgtgtc
tatttatggaccgcatcaaatagtaaagtgaccaggttgtgtgatttagggcctaatgac
agtgtatgctctgtgcaatggacccgggaaggctcatacatatcagttggtacacatctt
ggtcaagttcaggtgtgggatggaacacagtgcaagagggtccgaaccatgggagggcat
caaacaagaacaggtgtcttggcttggaactctaggacactagcatcaggaagcagggac
cgccatatacttcagcatgatcttcgaatttccagtgactatgtcagcaaacttattggt
cacaaatctgaggtatgtggcttaaaatggtcacatgatgacagggaacttgcatcaggt
ggaaatgataatcagctcttggtatggaatcagcactcccagctaccaattttgaaactg
actgaacacacagctgctgtcaaggccattgcttggtcaccccaccagagtggccttctt
gcatctggaggtggaaccgctgatagatgtattcgcttttggaacaccaccaatggtcat
caattaaaccatgttgacacaggaagccaggtgtgcaatctagcttggagcaagaatgtt
aatgagctggtcagcactcatgggtactcccagaatcaaattatggtgtggaaatatcca
tcattatccaaggttgcaactctagttggtcacagtttgcgagtactctatcttgccatg
tctcctgatggtcagacaatagtaactggagcaggggatgagacattgcggttttggaac
gtcttcccctctatgaaaacacagacaccagtgaaagatacaggcctttggtcattagga
cgaacccagattcggtga
DBGET
integrated database retrieval system
