KEGG   Populus trichocarpa (black cottonwood): 7488000
Entry
7488000           CDS       T01077                                 
Name
(RefSeq) syntaxin-81 isoform X1
  KO
K08492  syntaxin 18
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04130  SNARE interactions in vesicular transport
pop04145  Phagosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    7488000
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7488000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7488000
Membrane trafficking [BR:pop04131]
 SNARE
  Syntaxin (Qa)
   Stx-rER
    7488000
SSDB
Motif
Pfam: Syntaxin-18_N SNARE STX6_10_61_N YscO-like
Other DBs
NCBI-GeneID: 7488000
NCBI-ProteinID: XP_024463109
LinkDB
Position
8:3813012..3816321
AA seq 311 aa
MAKIRDRTEDFKDAVRHIAISLGYNETRLTAIMASFIIHKPRQRSPFTRAALKTLESIGA
LEQFMLKHRKDYVDLHRTTEQERDSIEQEVTAFIKACKEQIDILKNSINDEAANTKGWLG
IKADTSTTDTIAHKHGVVLILSEKLHSVTARFDQLRAIRFQDAINKRIPRRKLNRAANTN
TTTVDSSKTNNLEFSEPDDIQPESLRVQQQVLDDETRALQVELTSLLEAVQETETKMLEM
SALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVL
TFSILFLDWYS
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcgaaaattagagatagaacagaggattttaaagatgcagtgaggcacattgctata
tctttaggttacaatgagaccagattgacagctattatggcgtcttttattattcataaa
ccacggcaaagatcaccgtttactagagctgctcttaaaacgcttgaaagcattggagca
ttagaacaatttatgttgaagcataggaaggattatgttgatctgcatcgtaccactgaa
caggagagggatagtattgaacaagaggttactgcatttattaaagcatgcaaagaacaa
attgatattctcaagaatagcataaacgatgaagcagcaaacacaaaggggtggcttggc
atcaaggctgatacctccaccactgatactatagcacacaaacatggggtggttttgatt
ttaagtgagaaacttcattctgtcactgcacggtttgatcagctaagagctatacgcttc
caagatgctattaataagaggataccaagaagaaaacttaaccgggctgcaaatacaaat
acaactactgttgattcctctaaaacaaacaatttagagttcagtgaacctgatgacatt
cagccagagtctcttagagtgcagcagcaagtgttggatgatgagactcgtgccctgcag
gtggaattgactagtcttctagaagcagttcaagaaaccgaaactaagatgctggaaatg
tctgcattgaatcacctaatgtcaacgcatgttctgcaacaagcacaacaaatagagctt
ctgtatgagcaggcagttgaagctacaaagaacgtagagcttggaaacaaagagttgtct
caggcaatacagcggaatagcagtagcaggacttttctcttgcttttcctttttgttctt
actttttcaatcctctttctggattggtatagttga

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