Populus trichocarpa (black cottonwood): 7488000
Help
Entry
7488000 CDS
T01077
Name
(RefSeq) syntaxin-81 isoform X1
KO
K08492
syntaxin 18
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
pop04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7488000
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7488000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7488000
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-rER
7488000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
STX6_10_61_N
YscO-like
Motif
Other DBs
NCBI-GeneID:
7488000
NCBI-ProteinID:
XP_024463109
LinkDB
All DBs
Position
8:3813012..3816321
Genome browser
AA seq
311 aa
AA seq
DB search
MAKIRDRTEDFKDAVRHIAISLGYNETRLTAIMASFIIHKPRQRSPFTRAALKTLESIGA
LEQFMLKHRKDYVDLHRTTEQERDSIEQEVTAFIKACKEQIDILKNSINDEAANTKGWLG
IKADTSTTDTIAHKHGVVLILSEKLHSVTARFDQLRAIRFQDAINKRIPRRKLNRAANTN
TTTVDSSKTNNLEFSEPDDIQPESLRVQQQVLDDETRALQVELTSLLEAVQETETKMLEM
SALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVL
TFSILFLDWYS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattagagatagaacagaggattttaaagatgcagtgaggcacattgctata
tctttaggttacaatgagaccagattgacagctattatggcgtcttttattattcataaa
ccacggcaaagatcaccgtttactagagctgctcttaaaacgcttgaaagcattggagca
ttagaacaatttatgttgaagcataggaaggattatgttgatctgcatcgtaccactgaa
caggagagggatagtattgaacaagaggttactgcatttattaaagcatgcaaagaacaa
attgatattctcaagaatagcataaacgatgaagcagcaaacacaaaggggtggcttggc
atcaaggctgatacctccaccactgatactatagcacacaaacatggggtggttttgatt
ttaagtgagaaacttcattctgtcactgcacggtttgatcagctaagagctatacgcttc
caagatgctattaataagaggataccaagaagaaaacttaaccgggctgcaaatacaaat
acaactactgttgattcctctaaaacaaacaatttagagttcagtgaacctgatgacatt
cagccagagtctcttagagtgcagcagcaagtgttggatgatgagactcgtgccctgcag
gtggaattgactagtcttctagaagcagttcaagaaaccgaaactaagatgctggaaatg
tctgcattgaatcacctaatgtcaacgcatgttctgcaacaagcacaacaaatagagctt
ctgtatgagcaggcagttgaagctacaaagaacgtagagcttggaaacaaagagttgtct
caggcaatacagcggaatagcagtagcaggacttttctcttgcttttcctttttgttctt
actttttcaatcctctttctggattggtatagttga
DBGET
integrated database retrieval system