Populus trichocarpa (black cottonwood): 7488041
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Entry
7488041 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488041
KO
K21891
calcium load-activated calcium channel
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7488041
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7488041
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
7488041
Transporters [BR:
pop02000
]
Other transporters
Pores ion channels [TC:
1
]
7488041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6584
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
7488041
NCBI-ProteinID:
XP_002322739
UniProt:
A9PG09
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All DBs
Position
16:4141619..4142634
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AA seq
194 aa
AA seq
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MATPQFFLSSSKYSDSLTVVGISICTAIICETISWILIYRTNSYKSLKSSIDKASKKLET
MKTDTAKITTKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLIVVFGLLNSLFEG
KAVAKLPFQPITLVMKMSHRGLPGTDSTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGSA
PGAGFLPLPDTKTN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctaccccgcagttcttcctctcctcatcgaaatactcagacagcttaacagttgtc
ggaatctcaatctgcactgctattatctgcgaaaccatttcatggatccttatttaccga
acaaactcttacaaatctctcaaatcctccatcgacaaagcctctaaaaaactcgaaacc
atgaaaaccgataccgctaaaatcaccaccaagaaatccaaaaccaagaaaatcgaccgt
gtcgaatcttctttgaaagaatcaagccgtgacttgtcccttttcaaattcaaatctggg
gctgtcgttgctttagttttgatcgttgtttttgggcttttgaattcgctctttgaaggt
aaagctgttgccaaattgccctttcagcctatcactcttgttatgaagatgagtcataga
gggttacctgggactgattccaccgactgctccatggctttcttgtattttttgtgttcc
attagtattcgtactaatttgcagaagtttcttgggttttctccgcctcgtggttctgct
cctggtgctggttttctcccccttcctgataccaagaccaattga
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