Populus trichocarpa (black cottonwood): 7488047 Help Entry 7488047           CDS       T01077                                  Name (RefSeq) rRNA biogenesis protein RRP5   KO K14792   rRNA biogenesis protein RRP5 Organism pop  Populus trichocarpa (black cottonwood) Brite KEGG Orthology (KO) [BR:pop00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:pop03009]     7488047 Ribosome biogenesis [BR:pop03009]  Eukaryotic type   90S particles    Other 90S particles     7488047 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 OB_RRP5_4th OB_RRP5 Spt6_S1 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT_PRP39_N HAT_Syf1_CNRKL1_N NRDE-2 HAT_Syf1_M Motif Other DBs NCBI-GeneID:  7488047 NCBI-ProteinID:  XP_024443288 LinkDB All DBs Position 16:4368689..4386591 Genome browser AA seq 1939 aa AA seqDB search MTAPSKKKQQNPKQNDGPKFNKASQKQFKAKQTKNKKSFSNDAVVKDASIALQLEDDVPD FPRGGKSSLSQREREEIRAQVDEEFEGEERRLNKKNKKGKKFQNKSSQLSGDDLGSLFGD VLTGKLPRFANKITMKNISPGMKLWGVVTEVNEKDLVISLPGGLRGLVRSVDAVDPVLTD QIEDGEGSLPRVFHVGQLVSCIVLKLDDDKNDNKKRKIWLSLRLSLLHNGFSLDAVKEGM VLTAYVKSIEDHGFILHFGLSSFMGFLPKNSQAESRDSEVKTGQFLQGIVTKIDKTRKVV YLSSDPDTVSKCVTKDLKGISIDLLIPGMMVDARVQSTLENGIMLSFLTYFTGTVDMFHL QNTFPTSNWKDDYAKNKKVSARILFIDPSTRAVGLTLNQHLVHNNSPPSSVKVGDIYDIA KVVRVDKGMGLLLEIPSTPLPTPAFVNVSDVAEDEVRKLEKKFKEGSNVRVRILGYRHLE GLATGILKASAFEGSVFTHSDVKPGMATRAKIIAVDSFGAIVQFPGGVKALCPLRHMSEF EIVKPRKKFKVGAELFFRVLGCKSKRITVTHKKTLVKSKLPILSSYSDATDGLITHGWIT KIEKPGCFVHFYNGVQGFAPRSELGLEPGSDAISTYQVGQVVKCRVISSIAASRRINLSF IMKPLRFSEEDGIKMGSVVTGVIDKVTASSVIVYVNAKDYLKGTIATEHLSDHHEHAALM KSVLKPGYEFDQLLVLDIESNNLALSAKYSLIKSASQLPSDLSQIRPQSIVHGYICNMIE TGCFVRFLGNLTAFSPRSKAMDDQRSQLSEAFYIGQSVRSNILDVNNETSRITVSLKQSC CSSTDACFLQEYFLSENKIADLQSSDSKGRDLKWVEGFHIGSTIEGKIQESKEFGVVVSF EKHNDVFGFVSHHQLGGAMVKAGANVRAAVLDVAKTERLVDLSLKLEFLDKSRDKSSNSL THKKKRKGEMSKDLEVHQTVNAVVEIVKENYLVLSIPEHNYAIGYASVSDYNTQKISQKQ FLNGQSVSATVMALPTPSTAGRLLLLLKSISEVTETSSSKKAKRKSSCNVGSLVQAEITE IKPLEMRLKFGIGFRGRIHITEVNDTCLLENPFSNFRVGQTVSARIIAKAGQSDNKKSQL WDLSIKPKMLEDSCMIEDKLVPKEYEFSSGQHVSGYVYKVDGEWAWLTISRHLKAKLFVL DSACEPSELQEFQKRFYVGKAVTGHVLNYNKEKASLRLALHPFAASQTLVDGGAPIMDDL QGNAPWDNVTAHIREGDIVGGRISKILPGVGGLLVQLGPHIHGRVHFTELQDSWVPDPLS AYKEGQFVKSKVLEISHPVKGTIHIDLSLRLSLNGMLGQNSAEFSNNQDAPSKHVDKIED LQPDMVVQGYVKNVSSKGCFISLSRKLDAKILLSNLSEGYIDDPEKEFPIGKLLTGRVLS VEHLSKRIEVTLKKSGVSNASKSENSDLSRLHVGEIISGRIKRVESYGLFIALDHTNLVG LCHVSQLLDHIGNIESKYKAGEKVTAKILKVDEERRRISLGMKNLDVRDDMNSSKEESDE EKSENESMDDSNAQIKIIPESSLLGIHNIDVECQNERSILAQAESRASIPPLEVALDDTE HSHPDDVLLQNQGHIDEADTMVKKNKQEKKKPKKLSEQEISAAEERRLEEDEPRTADEFE MVIRSSPNNSFLWIAYMRFMLSLADIEKARSIAERALNTINIREEDEKLNIWVAYFNLEN EYGNPPEDAVKKVFQRALQYCDPKKVHLALLKMYKKTNQNKLAEELLDKMIKKFKHSCKF WLKRVKWLLKQKQDGVQSVVQRALLCLPRHKHIKFISQTAIREFKCGVADRGRTLFEEIL REYPKRTDLWSVYLDQEIKLGDADVIRSLFERAISLSLPPKKMKFLFKKYLEYEKSYGDE KQIESVKQKAMEYVQNTLA NT seq 5820 nt NT seq  +upstreamnt  +downstreamnt atgacagctccttcgaagaaaaaacaacagaatccaaaacaaaacgacggtccaaaattc aacaaagcatcacagaagcagttcaaagcgaagcagacgaaaaataagaagagtttttca aacgacgccgtcgtaaaagatgcgtctattgctttgcaacttgaagatgacgtccctgac ttccctcgaggtggtaagagttcgttgagtcagagagaaagagaggaaattagagcacaa gttgatgaagaattcgagggggaggagaggcgtttgaataagaagaataagaaggggaag aagtttcaaaacaagagtagtcaattatctggagatgatttaggttccctttttggcgat gttttaaccggaaaactgcctcgttttgctaataagatcacaatgaagaacatttctcct ggaatgaagctttggggagttgttactgaagtaaacgagaaggaccttgtaattagtctt cctggaggattgcgtggattagtacgttctgtggatgcagttgatcctgttttgactgat caaatcgaggatggtgaaggtagccttccaagagtattccatgtagggcagctggtttca tgcattgtgttgaagttggatgatgataagaacgataacaagaaaagaaagatttggctt tctctgcgcctttcgttattgcacaatggcttctcattagatgctgttaaggaagggatg gtcctcaccgcatatgtcaaaagcattgaagatcatggtttcatcctgcattttggtttg tcatcgtttatgggatttttgccaaagaacagccaagctgagagcagggattctgaagtg aaaactgggcaatttttacaggggattgttacaaagattgataaaactcggaaagttgtt tatctgagctctgacccagatacagtgtctaaatgtgtgactaaggatcttaagggcatt tcaattgatcttctcattccaggcatgatggttgatgcccgtgtacagtcgacccttgaa aatgggataatgttatcattccttacatactttactggaactgttgatatgtttcattta caaaatactttccctacttcaaattggaaggacgattatgccaagaataaaaaggtcagt gctcgtatattatttatcgatccctcaactagagctgttggtttgactctcaatcaacat cttgttcacaacaattcaccgccatctagtgttaaagttggagatatttatgacattgca aaagtagtcagggtagataaaggcatgggacttctacttgaaatcccatctactccgctg ccaactccagcatttgttaatgtatctgatgtggctgaagatgaggtacggaagcttgaa aagaagtttaaggaaggaagtaatgttcgtgttcgaatccttgggtataggcatttggaa gggcttgccacggggattttgaaggctagtgcttttgaaggatctgtattcacccactct gatgtcaagccaggcatggcaacaagggctaaaatcatagctgttgacagctttggggct attgtgcaatttcctggtggagtgaaggcactttgtccgcttcgacatatgtctgaattt gaaattgtgaaacctcggaaaaaattcaaggttggagctgagctgtttttccgtgtgctg ggttgcaagtccaagagaataactgtgacacacaagaaaactcttgttaaatctaaactt ccaattcttagttcatattctgatgcaactgatggactaataacacatggttggataaca aagattgaaaagcctggatgctttgtccatttttacaatggagtccagggatttgccccc agatctgagcttggattggaaccaggaagtgatgcaatttcaacttatcaagttgggcag gttgtcaaatgcagagtaataagttctattgctgcttcacgcaggatcaatcttagtttc ataatgaagcctctaaggttttctgaagaagatggcatcaagatgggtagtgtggttact ggagttattgataaagttaccgcctcttcagtaatagtttatgttaatgcaaaagactac ttgaaggggacaattgctaccgagcatttgtcagatcaccatgaacatgctgccttgatg aagtcagtcttgaagcctggatatgagtttgatcaactactggtcctagatattgagagc aacaatttggctctctctgcaaaatattctcttatcaagtctgcttctcagcttccttcg gatctaagccagattcgtcctcagtcaatagtccatgggtacatctgtaacatgattgaa actggctgctttgttcgctttcttgggaatttgacggctttctcccctagaagcaaggca atggatgaccaaagatctcagctttcagaagccttttacattggacaatctgttcgtagt aatatactcgatgttaacaatgaaacaagcagaataacagtgtctttgaagcagtcatgc tgctcatctacagatgcatgctttcttcaagaatactttctctcagagaacaagattgct gatctgcaatcttcagattctaaaggtcgtgacttgaagtgggttgaaggatttcatatt ggcagcactattgagggaaaaattcaggagtcaaaggaattcggtgttgttgtcagtttt gagaaacataatgatgtttttggttttgtttctcatcaccagttaggtggagcaatggtg aaagcaggtgcaaatgttcgagctgctgttcttgatgttgccaagacagaacgccttgtt gatttatctctaaagcttgagtttttggataaatcaagagacaagagttctaacagccta actcacaagaagaaacgaaaaggagagatgtctaaggacttggaggtgcaccaaacagta aatgcagttgttgagattgtgaaagaaaattacctggttctgtcaattcctgagcataac tatgccataggttatgcgtcggtatcagactataatacacaaaagatatctcagaaacaa tttctgaatggacaaagcgttagtgccacagttatggctcttccaaccccttctactgcc gggaggttgcttttgcttctgaaatctattagtgaggtgactgagacatccagttcaaag aaggccaagagaaagtctagctgtaatgttggatccctggttcaggcagagattactgaa atcaagcctcttgaaatgagattgaaattcggtattggttttcgtggaaggattcatata acagaggtcaacgatacttgtcttttggagaatccatttagtaacttcagagttggccaa acagtgtctgcgaggattattgctaaggctggtcaatctgataataaaaaaagtcagctg tgggatttgtctatcaaaccaaaaatgcttgaagattcatgcatgatagaggataaactt gtgcccaaggaatatgagttttcatctgggcaacacgtctctggttatgtatataaagtg gacggtgaatgggcctggttaacaatatctcgacatttgaaggcaaagctttttgttctc gacagtgcttgtgaacctagtgaacttcaagaattccaaaaaagattctatgttgggaag gccgtgactggtcatgttttgaactataacaaggagaaagcatcactacggttggcactc catccatttgctgcctctcaaactcttgttgatgggggagctccaattatggatgaccta cagggtaatgctccctgggacaatgttactgctcatattcgcgaaggagatattgtaggt ggtagaatttccaagatactgccaggtgttggtggattgctggtgcaacttggtcctcat atacatggcagggttcattttaccgaacttcaagactcgtgggttcctgatccattgtct gcatacaaagaaggtcaatttgtcaaatccaaggtcctagagataagccatccagtcaag ggtaccattcacatcgatctgtcattacgtttatctttgaatggcatgcttggtcaaaat tcagcagagttctcgaataatcaggatgctcccagcaaacatgtggataagattgaggat ctacaacctgacatggttgtgcagggttatgttaagaatgtttcatcaaaaggatgtttc atttcactttcaaggaaacttgatgcaaaaattctcctctcaaatctgtctgagggatat attgatgatcctgaaaaagaattcccaatcgggaaacttttaactggccgggtactatct gtggagcatctatcaaagcgaattgaagttaccttgaagaaatcgggcgtaagcaacgcg tcaaaatctgaaaacagtgatctgagtcgcctacatgttggggaaataatttctggcagg attaaacgggtggaatcatatgggttgtttatcgcacttgaccacacaaatttggttgga ttgtgtcatgtgtcacagcttttggatcatattggtaacattgaatcgaaatataaagct ggggagaaggttacagcaaagattttgaaggtggatgaggaaaggcgccgaatctctctt ggaatgaagaacttagatgttcgggatgatatgaactcttcaaaagaagaatctgatgaa gaaaagagtgaaaatgaatctatggatgacagcaatgctcaaataaaaataattccggag agcagtttgcttggtatccataacattgatgttgaatgccagaatgaacgttcaattctt gcccaagcagaatccagggcctcaattcctccgcttgaggtcgcacttgatgacacggag cactctcatccagatgatgtccttcttcaaaaccaagggcatattgacgaggcagacact atggttaagaagaataaacaagaaaagaagaaaccaaagaaattgagtgagcaagaaatt agtgctgctgaagagagacggctagaggaagatgaaccaaggactgctgatgaatttgag atggtgattcgaagctctcccaataacagttttctttggatagcatacatgcgcttcatg ctctctttggctgatatcgagaaggctcgctctattgctgaaagggctttgaatacaatt aatattcgagaagaggatgagaagctaaacatttgggtggcgtacttcaacttggaaaat gaatatggaaatcctcctgaggatgctgttaagaaagtttttcagagagcattgcaatat tgtgatccaaagaaggtccatctggcactcttgaaaatgtataagaagactaatcagaat aaattagctgaggagcttcttgacaaaatgatcaagaagttcaagcattcatgcaagttt tggttgaaacgggtaaagtggcttctcaagcaaaagcaagatggggttcagtctgttgtg caacgtgctcttttatgccttcctcgccataagcacatcaagttcatctcgcagacagct atccgtgagttcaaatgcggggtcgctgatagagggagaaccctgtttgaagaaattttg agagaatacccaaagagaacagacttatggagtgtttatcttgatcaggaaattaaactt ggagacgcggatgtgattcgttcactttttgagagggcaattagtctgagtcttccacct aaaaagatgaaatttttattcaagaaatatctggagtatgagaagtcttatggtgatgaa aaacagatcgagtctgtgaaacagaaggccatggaatatgttcagaataccctggcctga

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