Populus trichocarpa (black cottonwood): 7488073
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Entry
7488073 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7488073
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7488073
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7488073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
7488073
NCBI-ProteinID:
XP_052303936
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All DBs
Position
16:4661978..4666736
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AA seq
392 aa
AA seq
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MEVLEMDEAKKPEVHMTSAAAFVEGGIQDSCDDACSICLEEFCESDPSTVTNCKHEFHLQ
CILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL
QHLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRPHFLVFSTHPGAQ
PSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVLTDQSSSASGSTA
MPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVSMRYKESISRSTRG
WKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETRDDGGDNQVSVSNHLTDRSNV
ERSNQNTAATHIESPLNEGSTPAACAASSAST
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaggttctggagatggatgaagcaaagaaacctgaagttcatatgacatcagctgcg
gcatttgtggaggggggaatccaggactcatgtgatgatgcttgcagcatttgcctcgaa
gagttttgtgaaagtgatccctcaacggtgactaattgcaagcatgagttccatcttcag
tgcatccttgaatggtgtcagagaagctctgagtgtcccatgtgtttgcaatccattagt
cttaaagatcccaccagtcaagaattgtttgaggctgtagaacgggagaggaaaatcagg
gctgctccttcgagaaatgctactatttttcatcatcctacacttggggatttcgagttg
cagcatctaccagttggtgtaagtgattctgaacttgaggagcgtataatccagcacctg
gctgctgctgctgctatgggaaggacccgccactttggtaggagggaagggcagagaaac
aggacatcttcccatggccgtccacacttcttggtattttctactcatcctggtgcacag
ccttctggtcatgtttcttcctctttgactcagctaggcggggaaaatgaaccagctcca
gtctctgtagctagtccatccacacagctcacttctgttggggatgaaccaccacaacaa
gccttacaatccccttctgttttaactgatcaaagttcctctgcatctggatccacagcg
atgcctgcaaataatcaaggagtttcctttaataataggagcgcatctagccagtcttca
ctgccaaatcaagatagagccggaccatcagaattgcagtcattttctgagtctctaaaa
tctaggcttaatgcagtttcaatgaggtacaaagagtcaatttcaagaagtacaagaggg
tggaaggagaggctgttttctcgtaacagttcaatgtctgatatcagctctgatgttcga
agagaagtgaatgcaggaattgcaactgtatctcgtatgatggagcgccttgaaaccaga
gatgacggtggagacaaccaagtttctgtgtcaaatcatttgactgatcgctcgaatgtg
gagaggagcaaccagaatactgctgcgactcacatagagagcccattaaatgaaggaagt
acaccagctgcttgtgctgcaagttcagcatctacttaa
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