Populus trichocarpa (black cottonwood): 7488109
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Entry
7488109 CDS
T01077
Name
(RefSeq) scarecrow-like protein 14
KO
K27753
GRAS family protein LISCL
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7488109
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7488109
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Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
Motif
Other DBs
NCBI-GeneID:
7488109
NCBI-ProteinID:
XP_052311923
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Position
9:4329274..4332496
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AA seq
762 aa
AA seq
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MGSDSRYTEFPGSNKFEDEIVFPVSNQYQNVTNGFKIEDLDLDHLENPLVLPDPDPGNSA
LSSITSMDGDSPSDDNDSENLLKYISQMLMEENMEEKPCMFHDPLALQAAERSLYDILGE
KTLPSSPHESPSYGDQFLVDSPDDNFWSSRSDYSSNSSSTSNTASLVDPQWNGESGESKP
SFMQMPLSTNFVFQSAANPSSQSSFKLHNGLASNSDSAIKPSVGNIVVQNIFSDSDLALQ
FKRGVEEASKFLPKGNPLVIDLENSSLAPEMNRNAPNVVVKAEKEDKEDKEYLPEWLTGK
KNHEREDGDFEEERSNKQSAVYVDESELSEMFDMLLGFGDGCQPPQCILHEAEQRESGKT
LQQNGQTRGTNGSKTRAKRQGNNKEVVDLRTFLILCAQAVSVNDCRTANELLKQIRQHSS
PLGDGSQRLAHCFANALEARLAGTGTQIYTALSAEKTSAVDMLKAYQAYISACPFKKIAF
IFANHSILNVAEKASTLHIIDFGILYGFQWPSLIYRLSCRPGGPPKLRITGIELPQSGFR
PTERVQETGRRLAKYCERYNVPFEYNAIAQKWDTIQIDDLKIDRNEVLAVNCGFRFKNLL
DETVVVNSPRNAVLNLIRKTKPDIFVHAIVNGSYNAPFFVTRFREALFHFSALFDMLDTN
MPREDKMRLKFEKEFYGREVMNVIACEGSERVERPETYKQWQVRNMRAGLKQLPMDPLLI
KKLKCKVKAGYHEDFVVDEDGNWMLQGWKGRIVYASSAWIPA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggattctcgctacactgaattccctggctctaacaaatttgaggatgagatc
gtgtttccggtttcgaatcagtatcaaaatgttactaatggattcaaaattgaagattta
gacctcgaccatttagaaaatccacttgttttgcctgaccccgatccgggtaactctgct
ttgtcatcgatcacgagcatggatggagattctccttctgatgataacgactcggagaat
ctcctcaaatacataagccagatgcttatggaagagaacatggaagagaagccctgtatg
tttcatgacccgttggctcttcaagctgctgagagatcactttatgatattcttggtgag
aagaccctgccctcctcaccccatgaatctccttcttatggtgatcaatttttggttgat
agcccagatgataatttttggagtagccgcagtgattatagtagcaatagtagttctact
tccaatactgctagtttggttgatcctcaatggaatggtgagtctggggaatccaaacca
tcgtttatgcaaatgcctctttctactaattttgttttccagtctgctgcaaatcccagt
tcacaatcatcattcaaattacacaatgggttagcaagtaatagtgatagtgccataaag
ccctctgtgggtaacattgtggtacaaaatattttcagtgacagtgatttggcattacag
ttcaagagaggtgtagaggaagctagtaagttccttcctaagggtaatccactggttatt
gatttagagaacagttcattggcaccagagatgaacagaaatgccccaaatgtggtagtg
aaggctgagaaggaagacaaggaagacaaggagtatttgcctgaatggttgacaggaaag
aagaatcatgagcgggaggatggagattttgaggaagaaagaagtaacaagcagagtgca
gtttatgtagatgagagcgaactgtcagagatgtttgatatgctattaggatttggggat
ggatgccagcctcctcagtgtatacttcatgaggctgaacaacgtgagtcaggcaagact
ttgcagcagaatgggcaaacaaggggaactaatggtagcaagactagggctaagagacaa
ggaaataacaaggaagttgttgatttgaggacttttctaattctttgtgcgcaagcagtc
tctgtgaatgattgcagaactgctaatgaactgctgaagcagatcaggcagcactcttca
cctctcggtgatggatctcagaggttggctcattgttttgctaatgcccttgaagcacgt
ttagctggaactggtacccagatatacacggctttgtctgctgaaaaaacatcagctgtg
gatatgttgaaagcttatcaagcttacatttcagcttgcccgtttaagaagattgctttt
atctttgcaaaccatagtattctgaatgtggctgagaaggcatctacacttcatataata
gattttggtatattgtatggtttccagtggccttcccttatctatcgcctctcatgtaga
cctggtggtcctcccaaactgcgcattacaggaatagagcttccccaaagtggtttccgg
ccaacagagagagttcaagagacaggtcgccgcttggcaaagtattgtgagcgctataat
gttccatttgagtacaatgccatagctcagaaatgggataccatccaaattgatgacctg
aagattgatcgcaatgaagttcttgctgtaaactgtggctttagatttaaaaatctgctt
gatgagacagttgtagttaacagtccccggaatgctgttctaaacttaatcaggaagaca
aaaccagatatatttgtccatgctattgtcaatggatcgtataatgctccattttttgtc
acaaggttcagggaggcactgttccatttctctgctttgtttgatatgttagatactaat
atgccccgtgaagataagatgaggttgaagtttgaaaaagagttctatggtcgggaggtt
atgaatgtcatagcgtgtgagggctcagagagggttgagagacctgagacatacaagcaa
tggcaggttcggaacatgagagctgggctgaagcagcttcccatggaccctcttctcatc
aagaaattgaagtgtaaggtgaaggctgggtaccatgaagattttgtggtcgatgaagat
ggcaactggatgctgcaaggatggaaggggcggattgtctatgcatcctctgcttggatt
cctgcatag
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