Populus trichocarpa (black cottonwood): 7488126
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Entry
7488126 CDS
T01077
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7488126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7488126
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7488126
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
U-box type E3
7488126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
MLKL_N
HEAT_2
Arm_2
zf-RING_UBOX
KAP
zf-C3HC4_4
zf-Nse
Neurochondrin
HEAT_EZ
MCAfunc
zf-C3HC4_2
zf-C3HC4
zf-RING_2
DUF885
Motif
Other DBs
NCBI-GeneID:
7488126
NCBI-ProteinID:
XP_002313440
UniProt:
B9HPI5
LinkDB
All DBs
Position
9:complement(4077208..4081878)
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AA seq
663 aa
AA seq
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MEEENGGLVVQSLIETVNEIASISDYRCAVKKQYCNLARRLKLLTPMLEEIRDSKDSIIP
QQTLKALVSLKQALDSAKDLLKFGSEGSKIYMVLEREQIMNKYHEVTAKLEQALSGISYE
SLDISDEVKEQVELVLSQFRRAKGRADDTDVELYEDLLSLYNKTDDSAKDLAVLRRLSEK
LQLLGIADLTQESLALHEMVAATGGDPGENIEKMSMLLKKIKDFVQTENPNLDAPAREKN
LPPSGSGQAFADGSHKTPVIPDDFRCPISLELMNDPVIVSTGQTYERSCIEKWLEVGHDT
CPKTLQKLTSAALTPNYVLRSLIAQWCEANGIEPPKRPSSSGSNKTVSTCSPAERAKTEI
LLHKLASGSLEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRTQEHAIT
ALLNLSICEENKGSIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSLG
AIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTETGGGMVDE
AMAILAILASHSEGKAIIGAAEAVPVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHLVEA
QEHGVMGPLVDLAQNGTDRGKRKAQQLLERISRFFEQQKHTQAQIEAHIQQPQPPTVANS
GDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaacggaggactggtagtgcaaagtttgatagagacagtgaacgagata
gcttcgatctcagattacagatgcgcggtcaagaagcagtattgcaatctagctaggagg
ttgaagttattgacaccaatgttggaagagattagagacagcaaagactccatcatccct
caacaaactctcaaagctcttgtttcgctcaaacaagctttggattccgctaaagatttg
cttaaatttggtagcgaaggaagcaagatttacatggtcctagagagggaacaaattatg
aataaataccatgaggtgacagctaaattggagcaagctctaagtggaatttcctacgaa
agccttgacatatctgatgaagttaaggaacaggttgagcttgtcctttctcaatttaga
agagccaaaggaagggccgatgatactgatgttgagctgtatgaagatctcttgtccctt
tacaacaagactgatgattcagcaaaagatctagctgtcctcagaaggttgtctgagaag
ttacagttgttgggaatagctgaccttacacaagagtctctagctttgcatgagatggtt
gctgccactggtggagatcccggggagaacattgagaagatgtcaatgcttctgaagaaa
attaaagattttgtgcaaacagaaaacccaaacttggatgctccagcaagagaaaagaat
cttcccccaagtggcagtggacaagcttttgctgatggaagtcacaagacaccagttata
ccagatgatttccgctgtccaatatccctggaattgatgaacgatcctgtcattgtttca
acagggcagacctatgaacgttcctgcattgagaaatggctggaagtagggcatgacaca
tgtccaaagacactacagaaactcaccagtgctgctctgacacccaactatgttctacgc
agcctcatagcccagtggtgtgaagccaatggcattgagccaccaaaaagacccagcagt
tctgggtcaaataaaactgtatctacttgctcacctgctgagcgtgcaaagactgaaatt
ctccttcacaagcttgcatctggcagccttgaagaccagcggtctgctgctggtgagatc
cgtcttcttgccaagcgaaatgctgataatcgtgtggctattgctgaagctggtgcaatc
cctctccttgtaggcctcctctcaactcctgactctcgcacccaagagcacgcaattaca
gcgcttcttaacctctccatatgtgaagaaaacaaaggaagcattgtttcagctggggca
gttcctggtatagtgcatgtgctcaagaagggcagtatggaagctcgagaaaatgctgca
gccacccttttcagcctttcagttgtggatgaaaataaggttacaattggttctttgggg
gccatccctccactggtgactcttctaagtgaaggaacacaaagggggaagaaggatgcc
gcgactgcacttttcaacttgtgcatttatcaggggaacaagggaaaggcagtgagggca
ggagttgtgcccacattgatgcgtctattgacggaaacaggtggtggaatggttgatgag
gcaatggctatactagcaatactggctagccactctgaagggaaggcaatcattggagct
gcggaggctgtcccggttttggtggaagttatcaggaatgggtcacccaggaacagagag
aatgcagcagcagtgttggtgcatctttgttctggagaccaaaaacatctggtagaggca
caagagcatggagtgatggggccgctggtggatttggcacaaaatggcacagaccgggga
aagaggaaggctcaacagttgcttgagcgtataagcagattctttgagcaacaaaagcac
actcaggcacaaatcgaggctcacatccagcagcctcagccacccaccgttgctaattct
ggtgatagctga
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