KEGG   Populus trichocarpa (black cottonwood): 7488135
Entry
7488135           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABE1c
  KO
K07901  Ras-related protein Rab-8A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7488135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7488135
   03036 Chromosome and associated proteins [BR:pop03036]
    7488135
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7488135
   04031 GTP-binding proteins [BR:pop04031]
    7488135
Membrane trafficking [BR:pop04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    7488135
 Autophagy
  Other autophagy associated proteins
    7488135
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    7488135
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7488135
  Exosomal proteins of other body fluids (saliva and urine)
   7488135
  Exosomal proteins of colorectal cancer cells
   7488135
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    7488135
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA C2c1_Nuc-II FeoB_N AAA_29 PduV-EutP MCM AAA_16 AAA_22
Other DBs
NCBI-GeneID: 7488135
NCBI-ProteinID: XP_002313450
UniProt: B9HPK3
LinkDB
Position
9:complement(3918557..3922246)
AA seq 215 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQR
LSDTDTKAEPATSKIHLDQASGAGPAAQKSACCGS
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctgctccccctgctagagcccgagccgattatgactatctcattaagcttctcttg
atcggcgatagcggtgtgggcaagagttgccttcttttgcgtttctctgatggttccttc
acaactagttttatcactaccattggtattgactttaagataagaaccattgagcttgat
ggcaaaaggattaagcttcaaatttgggatacagctgggcaggagcggttccgaacaatc
acaactgcttattatcgtggagctatgggtattttgctggtctatgatgttactgatgaa
tcatctttcaacaacattaggaattggattcgcaacattgagcaacatgcttctgataat
gttaacaagatattggtagggaacaaggctgacatggatgaaagcaaacgggctgtacca
acatcgaagggccaagcactcgctgatgagtacgggatcaaattctttgaaactagtgca
aagacgaatcaaaatgtggagcaagttttcttttcaatagcaagggatataaagcaaagg
ctttctgacactgacaccaaggctgagcctgcaacatcaaagattcatctagaccaggcg
tctggagctggtccagctgcccagaaatcagcttgttgcggttcttaa

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