Populus trichocarpa (black cottonwood): 7488135
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Entry
7488135 CDS
T01077
Name
(RefSeq) ras-related protein RABE1c
KO
K07901
Ras-related protein Rab-8A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7488135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7488135
03036 Chromosome and associated proteins [BR:
pop03036
]
7488135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7488135
04031 GTP-binding proteins [BR:
pop04031
]
7488135
Membrane trafficking [BR:
pop04131
]
Exocytosis
Small GTPases and associated proteins
Rab GTPases
7488135
Autophagy
Other autophagy associated proteins
7488135
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
7488135
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7488135
Exosomal proteins of other body fluids (saliva and urine)
7488135
Exosomal proteins of colorectal cancer cells
7488135
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab8/10/13 [OT]
7488135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
C2c1_Nuc-II
FeoB_N
AAA_29
PduV-EutP
MCM
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
7488135
NCBI-ProteinID:
XP_002313450
UniProt:
B9HPK3
LinkDB
All DBs
Position
9:complement(3918557..3922246)
Genome browser
AA seq
215 aa
AA seq
DB search
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQR
LSDTDTKAEPATSKIHLDQASGAGPAAQKSACCGS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccccctgctagagcccgagccgattatgactatctcattaagcttctcttg
atcggcgatagcggtgtgggcaagagttgccttcttttgcgtttctctgatggttccttc
acaactagttttatcactaccattggtattgactttaagataagaaccattgagcttgat
ggcaaaaggattaagcttcaaatttgggatacagctgggcaggagcggttccgaacaatc
acaactgcttattatcgtggagctatgggtattttgctggtctatgatgttactgatgaa
tcatctttcaacaacattaggaattggattcgcaacattgagcaacatgcttctgataat
gttaacaagatattggtagggaacaaggctgacatggatgaaagcaaacgggctgtacca
acatcgaagggccaagcactcgctgatgagtacgggatcaaattctttgaaactagtgca
aagacgaatcaaaatgtggagcaagttttcttttcaatagcaagggatataaagcaaagg
ctttctgacactgacaccaaggctgagcctgcaacatcaaagattcatctagaccaggcg
tctggagctggtccagctgcccagaaatcagcttgttgcggttcttaa
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integrated database retrieval system