Populus trichocarpa (black cottonwood): 7488147
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Entry
7488147 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488147
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7488147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7488147
03016 Transfer RNA biogenesis [BR:
pop03016
]
7488147
03029 Mitochondrial biogenesis [BR:
pop03029
]
7488147
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
7488147
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
7488147
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
7488147
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
7488147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_P_p30
Motif
Other DBs
NCBI-GeneID:
7488147
NCBI-ProteinID:
XP_002314208
UniProt:
B9HPP6
LinkDB
All DBs
Position
9:3732043..3736565
Genome browser
AA seq
724 aa
AA seq
DB search
MGGFFDLNIPQDTTKTTRIKLVVKAMELGYSGIAYNRSIKGIMSDHDRCTIPLLSLSSLL
DVAPALAFSVNLHRDLLGIPRSSPFRQYTRLTVSVDTPSQAQVLNSGNPVLKTYDFVAVK
PLSQTAFDHACLKSEVDMIAIDFSVKLPFRLKLPMVKAAIERGVYFEITYSDLIADIQVR
RQMIPNAKLLVDWTRGKNLIFTSAASSVNDFRGPYDVANFSSLFGLSMERAKTAISKNCR
SLIANALRKKHFYKEAIRIEPISSDEISDTKELIYVNWLKWDPISSGGGDLQLGDIEKSF
SATTRVSTTAKAIDFSEVLNGMASNGASFSTTIPAIETPVAISGVSEKPGEFDFLLETDQ
ASSDNTSVKNQTSSNENSQEMNLPNDDTRAFTKFEGSRSHVSTIKEESKNSNISDVILPS
IVDERHDMQSQKCIPSCEINAVLSNASVMNLTSATDINNTTCVANAKIDTSCENANFLAP
LIENPSSLKGSDLVLCPQDVSLSENLMEMDVKDQEDIPVTEKVSSSDQLGESQSDLITIV
DYIPLLATDDTNIENYPLVANNLEVMMDEDDTYVTNNVMGRAQLEESGDEPIAPVDHIPL
SVTSDGMIVKDVPSVASSENLEKLAVEGQEHVDADSRCILVVDDDLKVKDNSPAETCMSL
EEVGMTRQMHEEANVESKHTALATFQSGKFKAKRRTSHQHPSFPLKRLLNPMAFKRTKKF
KRKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggggggattcttcgacctcaacataccccaagacaccacgaaaactacacgcataaaa
cttgttgtgaaagctatggagctaggatacagtggcatcgcatacaaccggagcatcaaa
ggtatcatgtctgatcacgaccgttgcacaatcccactcctgtccctttcctctttactc
gatgtagctcctgcccttgccttctccgttaatctccaccgtgacctcctcggaatccca
cgctcctcccctttccgtcagtacacgcgcttgactgtctctgttgatactccttctcag
gcccaggtgcttaactctgggaatcctgttttgaagacttacgattttgttgctgtcaag
cctctgagtcaaactgcttttgatcacgcctgtcttaaatccgaggtggatatgattgcc
attgatttctctgtgaagctaccgttccggttgaagctacctatggttaaagcggcaata
gagcgtggagtttatttcgaaattacttattctgatcttattgctgatattcaagtgagg
agacaaatgatacccaatgcgaagttactagtggattggactcgtggaaagaatctcatt
ttcacaagtgctgcttcttctgtgaatgattttagagggccctacgatgttgctaatttt
tcatctttgtttggtctttcaatggaacgagctaaaacagctatttcaaaaaattgtagg
agtctgatagcaaatgctttaaggaaaaaacacttttacaaagaagctatcagaatcgaa
ccaatatcatctgatgaaatatctgacacaaaggaacttatttatgtgaactggctgaaa
tgggatccaatctccagtggtggaggggatttacaactgggtgatatagaaaagtctttt
tctgccaccactagagtatccacaactgcaaaagcaattgatttttctgaggttttaaac
ggcatggcatcaaatggtgcaagtttttcaactactattccggcaattgagacaccagtt
gcaattagtggagtatctgaaaagcctggtgaatttgattttcttcttgaaactgatcag
gcttcatcagacaatacttcagtgaagaaccaaacttcgagcaatgaaaattctcaagaa
atgaatttaccaaatgatgatacgagggctttcaccaagttcgagggaagtagaagccat
gtgagtaccatcaaggaagaatccaagaattcaaacatatcagatgttattcttccttca
atagtggatgaaaggcatgatatgcaatcacaaaaatgcatccctagttgtgaaataaat
gctgtgttatctaatgcgagtgtgatgaatctgacatctgccacggacattaataatact
acttgtgttgctaatgctaaaatagatacttcatgtgagaatgctaattttcttgctcct
ctgattgagaacccctcaagtttgaaaggttctgatttagttttatgtccacaagatgtt
tctttgagtgaaaatttaatggagatggatgttaaagatcaagaagatattccagtgact
gaaaaagtttcaagcagtgatcagctgggagagtctcaaagtgatttgattactattgta
gattatatccctcttcttgccactgatgacacaaacattgaaaactaccctttggttgcc
aataacctggaagttatgatggatgaagatgatacatatgtgaccaataatgttatgggt
agagcacaacttgaggaatctggggatgaaccaattgcacctgtggatcatattccactt
tctgtaacctctgatggcatgattgttaaagatgtcccttcagttgcaagtagtgagaac
ctggagaagctagctgtggaggggcaagagcatgtagatgctgattctagatgtattctt
gtcgtggacgatgatttgaaagttaaagataactctcctgctgaaacttgtatgtctctg
gaggaagtgggaatgacaaggcaaatgcatgaagaagctaatgttgaaagtaaacataca
gcattggctacatttcaatcagggaaatttaaagcaaagcggaggacatcccatcaacat
ccttcatttcctctgaagcgtttgttgaatcccatggctttcaagagaactaaaaaattt
aagcggaaggtgtga
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