KEGG   Populus trichocarpa (black cottonwood): 7488176
Entry
7488176           CDS       T01077                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
  KO
K18466  vacuolar protein sorting-associated protein 26A/B
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04142  Lysosome biogenesis
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7488176
   04142 Lysosome biogenesis
    7488176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7488176
Membrane trafficking [BR:pop04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    7488176
SSDB
Motif
Pfam: Vps26 Arrestin_N
Other DBs
NCBI-GeneID: 7488176
NCBI-ProteinID: XP_002314237
UniProt: B9HPU3
LinkDB
Position
9:3357489..3364897
AA seq 301 aa
MNFLVGAFKPPCNVSINLADGRTRKQVPLKKENGQTVMVPLFQSQENIVGEVVIEPVQGK
KVEHNGVKIELLGQIELYFERGNFYDFSSLVRELDVPGELYERKAYPFEFSTVEMPFESY
NGVNVRLRYILKVTISRNYVSNIVEYQDFVVHNYTPLPSINNSIKMEVGIEDCLHIEFEY
SKSKYHLKDVIIGKIYFLMVRIKIKNMELEIRRRESTGSGPSTYVETETLSKFELMDGAP
VRGESIPIRLFLSPYELTPTYRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITVYRLLPT
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaatttcttagttggagcttttaaaccaccatgcaatgtttctatcaatcttgctgat
ggaagaacacgcaagcaggttcctttaaagaaggaaaatggccaaacagtcatggttcct
ctctttcaaagtcaagaaaacattgttggggaggttgtcatagaaccagttcaagggaag
aaggtcgaacacaatggtgttaaaattgagctgcttggtcaaatagaattgtattttgaa
cgaggcaacttttatgactttagttctctcgtgcgtgaacttgatgtacctggagagtta
tatgaaagaaaggcatatccctttgaattttctacagtggaaatgccatttgagtcctat
aatggagtgaatgtgaggcttaggtatatattgaaagtgacaatcagtcggaactatgtc
agcaacattgtcgagtaccaggattttgtggttcacaactacactccgcttccatcaatc
aataacagcattaagatggaagttggaattgaggactgtcttcatattgaatttgaatac
agtaaaagcaagtaccacctgaaggatgtcatcattggcaaaatatattttcttatggtg
agaattaagattaagaatatggagcttgagatcaggcgtcgcgagtcaacgggatcaggg
cctagtacatatgttgagacagagaccctatcaaaatttgagttgatggatggtgctcct
gtcagaggtgaatcgattccaattagattgttcctgagtccgtatgagttaacacccaca
tatcgcaacatcaacaacaaattcagtgtgaagtactacttgaatcttgttcttgttgac
gaagaagatagacggtattttaagcagcaagaaatcacagtttatcggcttcttccaact
ccttga

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