Populus trichocarpa (black cottonwood): 7488381
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Entry
7488381 CDS
T01077
Name
(RefSeq) origin of replication complex subunit 4
KO
K02606
origin recognition complex subunit 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
7488381
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
7488381
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Gene cluster
GFIT
Motif
Pfam:
ORC4_C
AAA_16
AAA
AAA_22
ORC-CDC6-like
RNA12
KAP_NTPase
DUF7516
nSTAND_NTPase5
AAA_14
Mg_chelatase
ATPase_2
Motif
Other DBs
NCBI-GeneID:
7488381
NCBI-ProteinID:
XP_002312422
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Position
8:complement(8223861..8227866)
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AA seq
417 aa
AA seq
DB search
MGIENLAEKAQILIRSRLCNPNFIFKPLSDSPDSNYSKLKFIISSSIMEACNNSILLLGP
RGSGKVAVLELVLSDLLEEYPDTITVIRLNGLLHSEDNSAFKEIARQLCMEHHLLFSKMA
SFDDNSQFMIAMLRECGLAHKTVIFALDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGV
SCRLDADQLLEKRVRSRFSHRKLLFLPPSKEDVQRLLEHILSLPMDSSLAHDYAAEFNEK
LQSILADERFKEIISNYLNSNSTTNHLLRFLFIAISNMELKSGFLSLENFKAALSSIQRQ
PKQECIKDCSILELYILVCMKRLEIREQNSYNFSSVMKEYKSIHDSFPTSDYYAQNVCLR
AFEHLLQRELICFTDNRGHSQSIEFRQVKLVVSYAELQEGLKSYRSCPAILLKLIDR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcgaaaatctagccgagaaagcacaaattctgataaggagcagactctgtaac
cctaatttcatcttcaagcctctctctgattcccctgacagcaactacagcaagttgaag
tttataatatcgagttcaatcatggaggcttgcaacaattctattctgcttcttggaccc
cgtggctctggcaaagtcgcggtattggagcttgttctcagcgacttactggaggaatat
cccgacacaatcactgtcatcagattgaatgggctattgcatagtgaggacaactctgcc
ttcaaggaaattgccagacaactatgtatggagcatcatttgttgttctcaaaaatggct
tcttttgacgataactcccagtttatgatagccatgttaagggagtgtggattagcacat
aaaacagttatttttgcacttgatgagtttgacctatttgcccaggggaaacaacgacta
ctttatagcttgttggatgcgatgcaatccgtaacatctcaggctgttgttgttggtgtt
agttgccggttggatgcggatcagcttttggaaaaaagagtgagatctcggttttctcat
aggaagttactgtttcttcctccatctaaggaagatgtacaaagattgctggagcacatc
ctatctttgccaatggactcaagtcttgcccatgactacgctgctgagttcaatgaaaag
cttcaaagtattttagcagacgagagattcaaagaaatcatcagcaattatctgaactcc
aattctaccaccaatcatttattgagatttctatttattgccatctcaaatatggaattg
aaatcggggttcttgtcacttgagaacttcaaagctgcactttcgagcatccaaaggcaa
ccaaagcaggaatgcataaaagattgctccatcttggaactctacatccttgtatgcatg
aaaaggttggaaattagagagcaaaattcttacaacttcagttcagtaatgaaagagtac
aaaagcatacatgattcgttcccgacatctgattattatgcgcaaaatgtttgcttacgg
gcatttgaacacctccttcaacgtgagttaatttgtttcacagacaacagaggtcacagt
caatctattgaattccgtcaagtgaagcttgtagtctcgtatgctgaactacaagagggg
ctgaaatcgtatcgatcctgtcctgccattcttctaaaattaattgatcgctga
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