Populus trichocarpa (black cottonwood): 7488900
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Entry
7488900 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488900
KO
K23325
transducin beta-like protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
7488900
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
7488900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Lactonase
WD40_MABP1-WDR62_1st
NBCH_WD40
WD_LRWD1
TruB_C
Beta-prop_EIPR1
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
7488900
NCBI-ProteinID:
XP_002320061
UniProt:
B9IBZ6
LinkDB
All DBs
Position
14:4394685..4400305
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AA seq
435 aa
AA seq
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MDQVLPIALISVLLGTAIALIFFKNYFLKRKSEIGSIAKPEIHPDPLRKPPKPTHQSKKS
HSHASSDKDHNKKHHPLDLNTLKGHGDSVTGLCFSYDGRSLATACADGVVRVFKLDDASS
KSFKFLRINVPAGGHPVAVAFSDDASSVVLASHTLSGSSLYMWGEEKVKDSNDSKQQPKL
PLPEIKWEHHKIHEKKVVLTLVGTASTYGNGDGSTIVASCSEGTDIKIWHGKTGKNLGTV
DTNQLKNTMAAISPNGRFIAAAAFTADVKVWEIVYSKDGSVKEVPKVMQLKGHRSAVTWL
CFTPDSEQIITASKDGSIRIWNINVRYHLDEDPKTLKVFPIPLHDSNGGTLHYDRLSLSP
DGRILVATHGSMLQWLCVETGKVLDTADRAHDGDITWIAWAPKPIPTGDGQTSILATASV
DKKVKLWAAPPLRSA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtcctcccgattgctcttatctcggtccttctcggtactgcaattgctctt
atcttctttaaaaactactttctcaaaagaaaatccgaaattggatccatcgcgaaaccc
gaaatccatccggatcctcttagaaaacctcctaaacctactcatcaatccaaaaagtct
cactctcatgcctcttctgataaggatcataacaagaaacatcatccgttggatttgaat
actttgaaaggtcacggtgattcagttacgggcctgtgtttctcttatgatggacgcagt
ttggctaccgcttgtgcagatggagtggtgagggtgttcaagttagatgatgcttcgagt
aaaagtttcaagtttttgagaattaatgtgccggctggaggtcacccggttgcagtggcg
ttttctgatgacgcgtcatctgtcgtgttggcgtcgcacacactgtctggttcgtcctta
tatatgtggggagaggaaaaggtcaaagattctaatgactctaagcagcaaccaaagctt
ccgctcccagaaatcaaatgggaacatcacaaaattcatgagaaaaaggtggttttgacc
ctggttggaactgcttcaacttatggcaatggcgacggaagtacaattgtggcctcttgt
tcggaaggtactgatatcaaaatttggcatggaaagacaggaaagaatttggggactgtc
gatacaaatcaattgaaaaacacaatggctgctatatcaccaaatggacgtttcattgct
gctgcagcttttactgcagatgtgaaggtatgggagattgtgtattcaaaggatggttct
gtcaaggaggttccaaaagtcatgcaacttaaagggcacaggagtgcagtaacatggtta
tgcttcactccagactcggagcaaatcatcacagcctccaaagatggttcaataagaata
tggaacatcaatgttcgttatcatcttgatgaggatccaaagactttaaaggtgtttccg
attccacttcatgattcaaatggtggaactttgcattatgatcgtctcagtttatcccct
gatggaaggatattggttgcaacccatggttcgatgctgcagtggttatgtgttgaaact
ggaaaggttttggacacagctgacagagcccatgatggtgacatcacatggattgcttgg
gcgccgaagcctattccaacaggtgatggacaaacgtccattttggccacagccagtgtt
gacaagaaagtgaagttatgggcagctccaccactccgatcagcataa
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