Populus trichocarpa (black cottonwood): 7488923
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Entry
7488923 CDS
T01077
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
7488923
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7488923
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
7488923
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7488923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
7488923
NCBI-ProteinID:
XP_024441443
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All DBs
Position
14:complement(4709409..4713683)
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AA seq
688 aa
AA seq
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MALKRGLSSSGVNKNRSGGGGGSRLPIILVIFFCFLSPLIFFVGRRLIITSSSADQNNNN
NAVGSGKQQLDWRERLALQHVKPLFSKEVIDVIASSTADLGPLSLDSFRKNKLSASWKVI
GGETPVDNKAASETNQTATVVKQEASKGKVDNISEDNARSGDTPAKLARRQLREKRREKR
VAELLRQDDEATARLENAAIERSKLVDGAVLGKYSIWRKEMDNENSDSTVRLMRDQMIMA
RVYLSIAKMKNKRDLLQELQTRLKESQRALGESSADSDLHPSAPGKLKAMGQVLSKAREQ
LYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTVPNGIHCLSMRLTIDYYLLPL
EKRKFPRSEDLENPNLYHYALFSDNVLAASVVVNSTIMNAKDSSKHVFHLVTDKLNFGAM
NMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKANHPTSLSSGSSN
LKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTKLWSVDLNGKVNGAVET
CGESFHRFDKYLNFSNPHIARHFDPNSCGWAYGMNIFDLKVWKKKDITGIYHKWQNMNED
RVLWKLGTLPPGLITFYNLTHPLQKSWHVLGLGYNPSIDRSEIENAAVVHYNGNMKPWLE
LAMTKYRPYWTKYIKYDHPYLRNCNLSE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagcggggattatcaagttcgggcgtgaacaagaaccgaagtggtggtggt
ggtggatctagattgccgattatactcgtgattttcttctgctttttgtcgccgttgatt
ttctttgtcggtcgacgactcattataacaagctcctctgctgatcaaaataataataat
aatgcagttggttctggtaagcagcaattggattggagagaacggctggccttgcaacat
gtgaagcctcttttctcaaaagaggtcattgatgttatcgcatccagcacagctgatttg
gggcctttgagtcttgattcttttagaaaaaacaagttgtctgcctcgtggaaagttatt
ggtggagagactccagtcgacaataaggctgcttctgagacaaaccaaacagctacggtt
gtcaagcaggaagcatctaagggaaaagttgacaacatttctgaagataatgctcgatcc
ggtgacacacctgcaaaactagctcgaaggcaattgagggagaaaagacgtgaaaaacgt
gttgcagagttactgcggcaagatgatgaagcaactgcaagacttgaaaatgcagccatt
gaacgctctaaattagttgatggtgctgttttgggaaaatacagtatatggaggaaagaa
atggataatgagaactctgattcaacagtacgcttaatgcgggatcagatgataatggca
agggtgtatttgagcattgcaaagatgaaaaacaagcgtgacttgctacaggaacttcag
actcggctcaaagagagtcagcgtgcccttggagagtcatcggctgattctgatctacat
cccagtgcacctggaaagttaaaagcaatgggccaagttctgtcaaaagcaagagagcaa
ttgtatgactgcaagttggttactggaaagctcagagcaatgcttcaaacagcagatgaa
caagttaggagcttaaaaaaacagagcacattcctgagtcaactggctgccaaaacagtt
cctaatggaatccattgcttgtctatgcgcctaacaattgactactacctccttcctctt
gagaagagaaagtttcctagaagtgaggatttggaaaatccaaatctttatcattatgcc
ctcttctctgacaatgtcttggctgcatcagttgttgtcaactcaaccatcatgaatgcc
aaggattcttccaaacatgtcttccatcttgttactgataaactcaactttggagcgatg
aatatgtggtttctactgaaccctcctggaaaagctactatccatgttgaaaatgttgat
gaattcaagtggctcaattcatcctactgcccagttctgcgccagcttgaatctgctgca
atgaaagagtattacttcaaagcaaatcatccaacttctctctcatctggctcttcaaat
ctgaagtatcgaaaccctaagtatctttcaatgcttaaccacttgaggttctatctccca
caggtctatcccaagttggataagatcctgtttcttgatgatgacattgttgtgcagaaa
gatttaactaaattgtggtcagtggatctaaatggaaaagtgaatggggcagtggaaacc
tgtggtgaaagttttcaccggtttgataagtaccttaacttttcaaatccccatattgcc
agacactttgatccaaattcttgtgggtgggcatatgggatgaatatttttgatcttaag
gtgtggaaaaagaaggatattacaggaatatatcacaagtggcaaaacatgaatgaagac
agggtactgtggaagcttgggacattgcctccagggctgattacattttataatctgaca
catcctcttcagaaatcatggcatgtgcttggattgggttataatccaagcattgatagg
tcagaaattgaaaatgcagctgttgtccactataacggtaacatgaagccatggctggag
ttagcaatgactaaatatcgaccatattggaccaagtacatcaagtatgatcatccatac
cttcgaaattgcaacctaagcgagtga
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