KEGG   Populus trichocarpa (black cottonwood): 7488937
Entry
7488937           CDS       T01077                                 
Name
(RefSeq) SNW/SKI-interacting protein
  KO
K06063  SNW domain-containing protein 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    7488937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pop03041]
    7488937
Spliceosome [BR:pop03041]
 Complex B
  Other components
   Prp19-related factors
    7488937
 Complex C
    7488937
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 7488937
NCBI-ProteinID: XP_002324443
LinkDB
Position
18:10381735..10384420
AA seq 612 aa
MAALKELLPPAKSTSATYYDHSNDPWFKQRFSSSEVEQSAGGGGINYKPVPLYLQRKGFV
PRKVEDFGDGGAFPEIHVAQYPLDMGRNKSAKPGSKILALTVDAHGNVAYDAIVRQNENA
KKIVYSQHKDLIPKILRSEEEGDEDGDGDGDEELQKEIEDTTLETKAALEKIVNVRLSAA
QPKNVPKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASG
SPPVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDN
FAKLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAAPPPS
APVPSERGAMDDVDMRGDYEHVKDRERDAPKETREEREERLRREKIREERRRERERERRL
EAKDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQRLFNQEKGMDSGFAAD
DQYSVYDKGLFTAQPTLSTLYRPKKDVDAEMYGGADEQLDKIMKTERFKPDKEFAGTSQR
TGPRDRPVEFEKDEEEADPFGLDQFLTEVKKGKKPTDKVGTGGTMRASAGSSMRDGHDGG
SGRTRIGFERGR
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcggctttaaaggaattactgcctccggcgaaatcaaccagcgcaacttattatgat
cattcaaatgatccgtggttcaagcagaggtttagttcatctgaggttgaacaatctgct
ggtggtggtgggatcaattataaacctgtacctctttacttgcagcggaagggttttgtt
cccaggaaagttgaagattttggagatgggggtgcgtttccagagattcatgttgcgcag
taccctcttgatatgggtaggaataagtctgcgaaacctgggtccaagattttggctttg
actgttgatgctcatgggaatgttgcgtatgacgctattgtgagacagaatgagaatgct
aagaagattgtgtattctcagcataaggatttgattccgaagattttgaggagtgaggaa
gagggagatgaggatggggatggggatggggatgaggaattgcagaaagagatcgaggac
actacgctggaaactaaagctgcgcttgaaaagattgtgaatgtcagattgagtgcagcg
cagccgaagaatgtgcccaaacagtcttcggattccaagtatataaagtacaagccttcg
caacagtcggcagcgtttaactcgggtgcaaaagagaggattattagaatggtggagatg
ccggtggacccgcttgagccacctaagttcaagcataagagggttccaaaggcatcggga
tcaccacctgtgccagttatgcactcgccacctcgacctgtgaccgtgaaggatcagcag
gattggaaaatcccaccttgtatctcaaattggaagaaccctaagggctacacgattcct
cttgataagcgtctggctgctgatggaagaggtttgcaggatgttcaaattaatgataat
tttgctaagctgtcagaagccctttatgttgctgagcaaaaggctagagaagctgttgct
atgagatccaaggttcaaaaggagatgatgatgaaggagaaggaaaggaaagagcaggag
ttgcgggcattagctcagaaagctcgttctgagagaactggtgctgcacccccaccgtct
gctccagtcccatcagagaggggtgcaatggatgatgttgacatgagaggggattatgag
catgtgaaggacagggagagggatgccccaaaggagacaagggaagagagggaagagagg
ctgcggcgcgagaaaattcgagaggagcgccgtcgagaaagggagagagaaagaagattg
gaagcaaaagatgctgcaatgggtaagaagagcaagatcactagagatagagatcgtgac
atcagcgagaaggttgctcttggtatggcctctactggagctggaaaagggggagaagtt
gcatatgatcaaaggttgttcaaccaagagaaaggaatggattctggttttgctgctgat
gatcaatacagtgtgtatgataaaggccttttcacggctcagcccacactttcaactcta
taccggccgaagaaagatgttgatgctgaaatgtatggaggcgcagatgagcaattagat
aagataatgaagacagaacgattcaaacctgacaaggaatttgctggtacttcacagagg
accggtccacgtgacaggccagttgagtttgagaaggatgaagaagaagctgatccattt
ggtctggatcagttcttgactgaagtaaagaagggtaagaaaccgacagacaaagttggt
actggtggcacaatgagagctagtgcaggatcttcaatgcgagatggccatgatggaggc
tctggtagaactcgtattggatttgagagagggcgttag

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