Populus trichocarpa (black cottonwood): 7488946
Help
Entry
7488946 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488946
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7488946
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Other ribosome biogenesis factors
7488946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-GeneID:
7488946
NCBI-ProteinID:
XP_024446377
LinkDB
All DBs
Position
18:complement(10559766..10562190)
Genome browser
AA seq
541 aa
AA seq
DB search
MEMGGIARARSISGGFRIKTVVHCSARSFSRSFSQRVDEGSGVVRVGKSLPWLNSKKVKE
AKGLEIGASGKSSNSYRGESVKRLEKVSGDSSWVNSRKRLEKGTVAETGYSSWEESKKRL
EEVAVGKTERSSWEDIAEAASGRENIHKVWNKESTRRMVGAAKNKPSGYGYNEREDGVEG
GEAEEDLEVVDDPRWDKIKNRFRGRVGVRGQTEKPDFQRWNRQDNWGRKTWKEATEFTVP
KIVGEGVFGVGPVLAALSTGRREFYALYIQEGLDLSGNNRKRKDKKGFEKVLRMAKKIGL
STKEVSKHDLNMIVDNRPHQGLVLDASPLEMVKIQELDAVLPDEEKGSLWVALDEVTDPQ
NLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLVSSAEN
GWRVLGGSVSSKAVSLSEVLPGQPTILVLGSEGTGLRPLVERSCTQLVRIPGNIPVDATV
GGGDEVKDEEINLECSSAEFRSFLAVESLNVSVAAGVLLHHLIGNNNENRSIGHTSTVVL
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgggagggatagctagagccagaagtatttcaggagggtttagaattaaaact
gttgtgcattgttctgctagaagtttctctagatcgttttcgcagagagtcgatgaaggg
agtggtgtggttagagttggaaagtcacttccttggttgaattctaagaaagttaaagaa
gcaaaagggttggagattggggcaagtggaaagagtagtaattcttacaggggggagtct
gtgaaaagattggagaaagttagtggtgactcttcctgggtgaattcgaggaaaaggtta
gagaaaggaactgttgcagaaacaggttactcatcttgggaggagtctaagaaaaggtta
gaagaagtggctgtcggaaaaactgaacgatcttcttgggaggacatagcagaagctgct
tctgggagagagaatattcacaaggtgtggaataaagaaagtacaaggagaatggtgggt
gctgctaagaacaagccaagtggttatggttacaatgaaagggaagatggtgttgaagga
ggagaagcagaagaggatctggaggttgttgatgatccaagatgggataagatcaaaaat
aggttcagaggaagggtgggtgtgagaggccagactgagaaacctgattttcaaaggtgg
aataggcaggacaattggggtagaaagacatggaaagaggctacagaatttactgttcct
aagattgttggtgaaggggtttttggggtgggtcctgttttggctgcattatcaactgga
agaagagaattctatgcattgtatattcaagaagggttggatttgagtggcaataatagg
aagaggaaggacaagaaagggtttgagaaagtgttgaggatggctaagaaaattgggtta
agcacaaaggaagtttcaaagcatgaccttaatatgattgttgataatcgcccccatcaa
ggccttgttcttgatgcatctccattggagatggtgaaaatacaggaattagatgcagtt
ttacctgatgaagaaaagggctctctttgggtagccttggatgaggttacagatcctcag
aatctgggggcaattatcaggtctgcttacttctttggggcttcaggggtggtgctatgt
gcaaaaaattctgctccattgagtggagttgtgagcaaagcaagtgcaggttcacttgaa
ctaatggagcttaggtattgcaaaaatatgatgcaattcttggtttcatcagctgaaaat
ggatggcgagttcttggtggttctgtttcttcaaaagctgtttctctgagtgaggttttg
cctggtcaacccacaatccttgttttgggcagtgagggcactggtttgaggccattggtg
gagagatcatgtactcaattagttcgaatccctggaaatattcctgttgatgcaactgtg
ggaggaggtgatgaagtgaaagatgaagaaataaatcttgagtgctcgagtgcagagttc
cgatcctttttggccgtggagagcttgaatgtcagtgttgcagctggtgtgcttcttcac
catttaattggaaacaacaatgagaatcgcagcatcggtcatacttcaacagtcgtactg
gaatga
DBGET
integrated database retrieval system
