KEGG   Populus trichocarpa (black cottonwood): 7488958
Entry
7488958           CDS       T01077                                 
Name
(RefSeq) adagio protein 1
  KO
K12115  clock-associated PAS protein ZTL
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pop00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    7488958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7488958
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     7488958
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_4 Kelch_3 Kelch_2 Beta-prop_ATRN-LZTR1 Kelch_5 Kelch_6 Kelch_1 PAS_9 F-box-like PAS PAS_3 NANM F-box PAS_4
Other DBs
NCBI-GeneID: 7488958
NCBI-ProteinID: XP_002324465
LinkDB
Position
18:11130374..11138059
AA seq 613 aa
MEWDSDSDLSGEEDEEGFMLNDGGGGPLPFPVENLLQTAPCGFVVTDALEPDHPLIYVNT
VFEMVTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRRCLEEGIEFQGELLNF
RKDGSPLMNRLRLTPIYGEDDTITHVIGIQFFTEANIDLGPVPGYSVKESSKLADKFRSG
FSTYRPIPVGDRNVSRGICGILQLSDEVLSLKILSRLTPRDIASIGSVCRQLYELTKNED
LWRMVCQNAWGSETTRVLETVPGAKRLGWGRLARELTTLEAATWRKLTVGGSVEPSRCNF
SACAVGNRVVLFGGEGVNMQPMNDTFVLDLNSSNPEWQHVHVSSPPPGRWGHTLSCVNGS
HLVVFGGCGRQGLLNDVFILDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGC
ADSGVLLSDTFLLDLSMEKPIWREIPVSWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLR
FRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPSGIAPPPRLDHVAVSLPGGRILIFGGSV
AGLHSASQLYLLDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWML
SELHELSLASSAT
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggagtgggatagcgattcggatctgagcggggaggaagatgaggagggattcatgtta
aacgacggaggaggaggtcctttgccttttcctgtcgagaatttgctgcaaactgctcct
tgtggatttgttgtcactgatgctcttgaacctgaccatcctcttatttatgtcaacact
gtttttgagatggttactggctatcgagctgaggaagttcttggccgtaattgccgtttc
ttgcaatgcagaggaccatttgctaaacgaaggcatccattggtcgactccacagtggtt
tcggaaataagaagatgcctcgaagagggcattgaattccaaggtgagttgttaaacttc
agaaaagatggatctccactgatgaacaggctgcggcttactcctatatatggggaggat
gacacaattactcatgttattggaatccagttcttcaccgaagctaatattgatctaggt
cccgtgcctggttattcagtaaaggagtcttcaaaattggctgataagtttcgttctggt
ttttccacctatcgtccaatcccagtaggtgatcgtaatgttagccgtggcatctgtggg
atactgcaattgagtgatgaggtactgtctcttaagatactttcacgtttgactccaagg
gatattgcttcaattggttctgtctgcagacaactctatgagctgacaaagaatgaggat
ctctggagaatggtctgtcagaatgcttggggtagtgaaacaactcgagttctagagact
gtgcctggtgcaaagagacttggctggggtcggcttgctagggaattgacaactcttgaa
gcagcaacatggagaaagctaaccgttggaggttctgttgaaccctcaaggtgcaatttc
agtgcttgtgcagttggtaatcgagttgtactttttggtggggagggtgttaacatgcag
ccaatgaatgatacctttgtcctggatctgaactccagtaacccagagtggcaacatgtc
catgtgagctcccctcctcctggtcggtggggacatacactttcttgtgttaatgggtct
catttggtggtttttggaggttgtggaaggcaaggtctattgaatgatgtctttattttg
gatttggatgccaagcctccgacttggcgtgagatttctggattggcccctccacttcca
cgatcatggcacagttcctgcacccttgatggcactaagttgattgtctctggtgggtgt
gcagattctggagtacttcttagtgacacatttctgcttgatttgtcaatggagaagcct
atctggagggagataccagtttcatggaccccaccatctcggctaggtcacactctctca
gtttatggaggaagaaaaatattgatgttcgggggtttggctaagagcggtccccttcgg
ttccgctccagtgacgtgtttactatggatctaagtgaggaggaaccttgttggagatgt
gtaacagggagtggaatgcctggtgctggaaaccctagcggcatagctcctccacctaga
cttgatcatgtagctgtgagccttcctggtggtagaatcctgatctttggtggctctgtt
gcaggtcttcactctgcctcgcagctttatctccttgatcctactgacgagaaacctaca
tggaggattctaaatgtacccgggcgacctccaagatttgcttgggggcacagtacctgt
gttgttggagggacaagggctatagtccttggtggtcaaactggggaggagtggatgctg
agtgagctccatgaactgtctttggcaagttcagccacctaa

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