Populus trichocarpa (black cottonwood): 7488960
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Entry
7488960 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7488960
KO
K12846
U4/U6.U5 tri-snRNP-associated protein 3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7488960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7488960
Spliceosome [BR:
pop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
7488960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNRNP27
Motif
Other DBs
NCBI-GeneID:
7488960
NCBI-ProteinID:
XP_002324468
UniProt:
B9ILX6
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All DBs
Position
18:11184645..11187995
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AA seq
195 aa
AA seq
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MGDRDRLTDRDRERDRDRDRDRERRRDKEDRDRDRTRITRSRTRSPDRMRSRNRRSRSRS
PDRSHRSHRRHRHQRTPSSSPPRKRHRPESDDDREREKQRAAVFDFVDGIAREQLEKNES
DNNDNGMGEGGGLMDEDEMEMMKKLGIPTGFDSTKGKPVPGADVSGVKAVTKRQPRQYMN
RRGGFNRPLPLERNR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagagacagactcaccgatcgcgaccgtgaaagagaccgcgaccgagaccga
gaccgagaaagacgccgcgataaagaagaccgcgaccgggaccggacccgaatcacccgc
tctcgcacgcgctcaccagaccgcatgcgttcccgaaacaggcgctctcgttctcgctct
ccagaccggtctcatagatctcaccgccgccaccgccaccagaggactccatcctcgtca
ccgccgcgaaagcgacatcgacccgagagcgatgacgatagagagagggaaaagcaaaga
gcggcggttttcgattttgtagacgggatagcgagagagcaattagagaagaacgaaagt
gataataatgataatggaatgggagagggtgggggtttgatggatgaggatgagatggag
atgatgaagaaattagggattccaacggggtttgattcgacgaaagggaagccggtgcct
ggtgcggatgttagtggagttaaagccgttacgaaacggcagcctaggcagtatatgaat
cgtagaggagggtttaatcggcccttgcccctggagcggaatcgctga
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