Populus trichocarpa (black cottonwood): 7489183
Help
Entry
7489183 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
7489183
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7489183
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
7489183
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7489183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
7489183
NCBI-ProteinID:
XP_052310233
LinkDB
All DBs
Position
6:complement(94083..98368)
Genome browser
AA seq
655 aa
AA seq
DB search
MRLRNLVFGLLSLSVLAPILLYIDSFSSFTPSFKQEFLEDVTALILPADTSNLNVLPQXM
AISLSLFAIGILYTDNHSKTILTDKDLQLPDTGRALSATDEDAQSRKDDIIKQVIQSANQ
EKEETRTDRGADQESHQLKQQSALNSDKVGEKDALLTKTNKQTDQSPMPAAWERQLRDRL
IKASVYLSLPATKNNRRFTRELRMRIKEVQRVLGDAIKDSDMPKNAYEKWKAMDQLLEKG
KQMQYESANEVKKLRAMLHSTEEQLRVHKKQTMSFATMVEKLRAMLHSTEEQLQVHKKQT
MFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSSEQQFPNQEILDNPLLHHIALFSDNVLAA
AVVVNSTVTNSKHPSKLVFHLVSDRLSYAAMRMWFLVNPPGKATIQVQNIDEFTWLNSSY
SPVLKQLHSQSMIDYYFRAHSANSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLD
DDIVVQKDLTGLWSLDLKGKVNGAVETCRESFHRFDTYLNFSNPLISNNFDPRACGWAYG
MNLFDLEEWKRQNITDVYHSWQKLNHDRQLWKLGTLPPGLITLWKRTHPLDRRWHVLGLG
YNPNVSQIEIERGAVIHYNGNMKPWLEIGIPKYRKYWAKYVDYVNVYLRECNINP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaggaatttggtgtttggtttgctctccctctctgtattggctcccattctt
ctttatattgatagtttctcctctttcaccccttctttcaaacaagaattcctcgaagat
gtcactgctcttattctccctgccgataccagtaatctaaatgtattgccacagngtatg
gctatttctttatctttatttgccattggaattctatatactgataaccactccaagacc
attctaactgacaaagatttgcagttgcctgatacaggtagagcattatctgccactgat
gaggatgctcaatctcggaaggatgatatcatcaaacaggtcattcagagcgctaatcag
gaaaaggaggagacccggacagacaggggagctgatcaggaaagccaccagcttaagcaa
caatctgctttaaactcagacaaagttggtgagaaggatgctttgttaactaaaaccaac
aagcagacagatcaatcacctatgccagctgcttgggagcggcagctcagggatcggctt
atcaaggcaagtgtgtacctgtcccttccagccacgaagaacaatcgccgctttacaagg
gagcttcgaatgcggataaaggaagttcaacgcgtacttggagatgcaatcaaagattct
gatatgccaaagaatgcctatgaaaaatggaaggcaatggaccaattgttggaaaagggc
aagcaaatgcagtatgaaagtgctaacgaggtaaagaagcttcgggcaatgctccactcg
acagaagaacaactccgagtgcataagaagcagaccatgtcctttgctacgatggtagag
aagcttcgggcaatgctccactcgacagaagaacaactccaagtgcataagaagcagacc
atgttcttaacgcaattaactgcaaagacgcttcctaaagggttacactgtcttccattg
cgcctgacaactgagtattacaatttgaattcttcggaacagcaatttccaaatcaagag
atattggacaaccctttgcttcaccatattgcactattctcggataatgttttggcggca
gcagtggttgtaaactctactgtcaccaactctaagcacccttcgaagcttgttttccac
cttgttagtgatagactcagctatgcggcaatgaggatgtggtttctagtaaatccacca
ggcaaagccactattcaggtccagaacattgacgaatttacatggttaaattcaagttat
agtcctgttctgaagcagttgcattctcagtcaatgattgattattacttccgggcacat
agtgccaattctgattcgaatttgaagtaccggaacccaaagtacttgtccatcctgaac
catcttcgcttttacctgccagagattttcccaaagctcaacaaggtgttattcttagat
gatgatatagtggtgcagaaggatcttactggcctttggtcccttgatttgaagggtaag
gtgaatggtgcagtagagacctgtagagaaagctttcatcgctttgatacatatctcaac
ttctcaaatcctcttatatcaaataatttcgatccccgcgcttgtggatgggcatatgga
atgaacttgtttgatttggaggaatggaagaggcaaaatatcactgatgtatatcattca
tggcagaagctgaaccatgacagacaattatggaagttggggactctgccacctggcctc
attactctttggaaacggactcatccccttgatcgacgttggcatgttctgggccttggc
tataaccccaatgtcagccaaatagaaattgaacgaggtgctgttatacattataatggc
aacatgaaaccatggcttgagataggcatacccaagtatcgaaaatactgggcaaaatac
gttgattatgttaatgtttatttgcgagagtgcaacatcaatccatag
DBGET
integrated database retrieval system
