Populus trichocarpa (black cottonwood): 7489279
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Entry
7489279 CDS
T01077
Name
(RefSeq) 3-ketoacyl-CoA synthase 12
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00062
Fatty acid elongation
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04626
Plant-pathogen interaction
Module
pop_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
7489279
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7489279
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
7489279
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
7489279
NCBI-ProteinID:
XP_052311581
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Position
9:complement(3816822..3818535)
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AA seq
461 aa
AA seq
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MDFLLLVYAFLIFYPLFVLWRGIDRKRDRECYILDYECYKPTDDRKLDTEFSGKVIMRSK
QLGLNEYKFLLKAIVSSGIGEQTYGPRIMFKGQEENPTLQDSVSEVEEFFHDSIEKLLAR
SGISPREIDVLVVNVSMLSSVPSLAARIINHYKLREDVKVFNLSGMGCSASLISVDIVQN
VFKSCKNVYALVVTSESLSPNWYSGNDRSMILANCLFRSGGCAILLTNKRALKHRAMFKL
KCLVRTHHGARDESYDCCLQREDEQGRLGFHLGKSLPKAATRALVDNLREITPKILPVRE
LLRFMVVSFIRKYWSHRSTKGVVSPKPVINFKTGVDHFCIHTGGKAVIDGIGVNLDLTEY
DLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKRGDRVLMMSFGAGFKCNSCLWEVVRD
LDADNVWKDCIDSYPPKSLANPFMEKFGWINNEDPSTFVMR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggattttctcttgttagtatatgctttcctaatcttctatcctctcttcgtgttatgg
agggggattgataggaaaagggaccgagaatgttatatactagactatgagtgctacaaa
ccaacagatgacaggaagcttgacacagagttttctgggaaagtgataatgaggagtaaa
cagcttggtcttaacgagtacaagtttctgttgaaagctattgtgagctctggaattggg
gagcaaacctatggtcccaggatcatgttcaaaggccaagaggaaaaccctacattacaa
gattcagtttctgaggtggaggagttctttcatgacagcatcgaaaagctcttggccagg
tcaggcatttctcctagagaaattgatgttcttgtagttaatgtctccatgctgtcttcc
gtgccttctttagctgctaggatcataaatcactataaactaagggaggatgttaaggtt
tttaacctctctgggatgggttgtagtgcaagccttatatcagtcgacattgtccaaaac
gttttcaagagttgcaagaatgtttatgcgcttgttgtcacctcggagtctttaagccct
aattggtactcagggaatgatagatcgatgattcttgcaaattgtttgttccgatctggt
gggtgtgccatccttttgactaacaaaagggccttaaagcaccgagccatgttcaaattg
aagtgcctagttaggacacaccatggggctagagacgagtcatatgactgttgccttcaa
agagaagacgagcaagggcgcctagggtttcacctaggcaagtcactaccaaaggccgct
acacgagctttggtcgacaaccttagagaaataaccccaaagatcttgccagtaagggag
ctacttagatttatggtggtgtcattcatacggaaatattggagccatagatccacgaag
ggagtagtcagtcctaaacctgtgattaacttcaagaccggtgttgatcacttctgcatc
cacaccggtggcaaggcggtgatagacgggattggcgttaatcttgatctcaccgagtat
gatctggagccagcaagaatgacattgcacaggtttggcaacacatctgctagcagtctt
tggtatgttttgggatacatggaggccaaaaagaggctaaagagaggcgatagggttctg
atgatgagttttggtgcgggctttaaatgcaacagctgtttgtgggaggtggtgagagac
ttggatgcagataacgtgtggaaggactgcattgatagctatccaccaaagtcactggcc
aatccattcatggagaagtttgggtggataaacaatgaagatccaagcacttttgtaatg
cgttaa
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