KEGG   Populus trichocarpa (black cottonwood): 7489321
Entry
7489321           CDS       T01077                                 
Name
(RefSeq) la-related protein 1A
  KO
K18757  la-related protein 1
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7489321
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     7489321
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 7489321
NCBI-ProteinID: XP_002313496
LinkDB
Position
9:complement(3031726..3047996)
AA seq 910 aa
MVMAENESGDDQKSSSTVGPKSPWKSPVVADAPVMGAAEFWPALSDAQQQQQQHRSKLTD
SASKTPPQPPLMVAGGGDKAAPPAASPRGSAGQHKSHGSGYSNTSNKHSSSRHQKSGSKR
NPNGAHPFSVPFPYQQPAMSPVFPAMAPPPHIAVSGYPYQPGPPPFPTVETHLMKSGSET
GPPMQPFAPSINVQPPPRGDPNAYAVNFPNRRPNMQDSGGHLNPTWHHQRAFGSRDNIPL
QQVMGPRPLVRPPFFAAPPGYMVGPTFPGPPPICYVSVAPPGSLRGPQPSCFVPYPINSG
APVLSQETLALRASIAGQIEYYFSDENLQNDHYLISLMDDQGWVPVSTIAEFKRVKKMTL
DISFILDALQCSGSIEVQGDKVRKRDDWSKWIPASSQQAVSPKAQTSEAQAGENAEEDDT
ISVSKGSAGFASHTTVKAVNKLSNGDAGKMEVDGKSILFKAGKPGCDGNSELGACHSTPH
LDRAQGTGPPTFNYHGTEGMEDAQNLADLSSDFANTFMLDEELELEQKTLKNDECSPVRR
IDDEEDEMVVHDQDVQRLVIVTQNSRVGEGSTKSGGKESKSISSELASAINDGLYFYEQE
LKTKRSNRRKNASTYENRDGYLRLTNSASLISKSKAGENSAASCGHEESGSSNNTRKQNK
VPKQQSYHKQRFFSSNSRNHGTGRNNFGIISESPPSNSVGFFFSSTPPENHGLRSSKLSV
SPHSMLLGSSPPVGSMPKSFPPFQHPSHQLLEENGFKQQKYLKYRKRCLNDRKKMGIGCS
EEMNTLYRFWSYFLRNIFVPSMYNEFQKFALEDASANYYYGMECLFRFYSYGLEKEFRDD
LYKDFEELTLDFCRKGNIYGLEKYWAFHHYCRLGDKEPKKHPELERLLRDEYRTLEDFRA
KEKSMKKDSH
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggtgatggcggaaaatgagagtggagatgatcaaaagagtagtagtacggtcggaccg
aagtcgccgtggaagtctccggtggtcgctgatgctccggtgatgggcgccgccgagttt
tggcctgctctttctgatgctcaacaacaacagcaacaacatcggtcgaagctgactgat
tctgcttctaagacgccgccgcagccgccattgatggttgctggtggtggtgataaggct
gcgccaccggcagcttcacctcggggatcagctgggcagcataagtcacatggatctgga
tattcaaatacatcaaataaacattcatcatcaagacatcaaaaatcaggatctaagcgc
aatcctaatggggcacatcctttctccgtgccattcccttaccaacaaccagccatgtca
ccagtttttccagcaatggcacctcccccacacattgctgtttctggctatccatatcaa
cctggccctccaccttttcccacagttgaaactcatttgatgaagtctggatcagagacg
ggaccccctatgcaaccttttgctccatctataaatgtccagcctccacctagaggggat
cccaatgcttatgctgttaactttccaaatcgaagacctaacatgcaagactctggtggc
catttgaatccaacatggcatcatcaacgggcatttgggtccagagataacatcccgctg
caacaggttatgggaccaaggccattggtaaggccacctttttttgccgcacctccaggg
tacatggtcggtccaacattccctggaccaccacctatatgctacgtatctgttgcacct
ccaggctctctcaggggacctcaaccttcctgttttgttccatatccaattaattcaggg
gctcctgtgctttcccaagagacactagctttgagggctagcattgcaggacaaatagag
tattatttcagcgatgaaaatctgcagaatgaccattatctaatatccttaatggatgat
caaggatgggttccagtatccacgattgctgaatttaaaagggttaagaaaatgactctg
gacatatcatttatccttgatgcgctgcagtgttctggctctatagaagtgcagggtgac
aaggttcggaaacgagatgattggtcaaagtggattccagcttcttctcagcaggcagtg
tcaccgaaggctcagacttctgaggcccaagctggagagaatgctgaggaagatgacaca
atcagtgtctccaaaggaagcgctggatttgcttcgcacactacagtcaaggcagtaaac
aaattgtcaaatggagatgctgggaaaatggaagttgatgggaagtctatcctgtttaaa
gctggaaaaccaggatgtgatgggaattcagagcttggtgcttgtcatagcactccccat
ttggaccgtgcacaaggaactgggcctccgacattcaattatcatgggactgaagggatg
gaagatgcacagaatcttgctgatctttcaagtgattttgccaacacatttatgcttgat
gaagagctggagcttgagcagaaaacactcaagaatgatgaatgttctccagttagaagg
attgatgatgaagaggatgagatggtggtccatgaccaggatgttcaaagacttgtgatt
gtcacccagaatagtagagtgggagaaggatctaccaaatctggtggtaaagaatcaaaa
tctatttcatccgagcttgcttctgcaataaacgatgggctatacttctatgagcaggag
ctcaaaactaagcgatctaatcgtagaaagaatgcttctacctacgagaacagagatgga
tatttaagactgacaaacagtgcttcactaatatcaaagtcaaaggctggtgaaaattct
gctgcaagctgtggccatgaagagtcgggaagctccaacaacacaaggaaacaaaataaa
gttcccaagcagcagtcataccataagcaacggttcttctccagcaactctaggaatcat
ggcactggtcgcaataattttggaatcatatcagaaagtccaccaagcaattcagttgga
tttttctttagttctacacctcctgaaaatcacggactcagatcttcaaagttgagtgtt
tcaccccacagcatgctactgggcagcagtccaccagtaggttccatgccaaagtcattc
ccaccgtttcagcatccgagccatcaactcttagaagaaaatggctttaaacagcagaag
tacttgaagtatcgtaagcggtgcttaaatgatagaaagaagatgggaataggctgcagt
gaggaaatgaatacactgtataggttttggtcgtacttccttagaaacatttttgtccct
tctatgtataatgagttccaaaaatttgcgctggaagatgcatctgctaattactattat
gggatggagtgccttttcaggttctatagttatggcttggagaaggagttcagagatgac
ttgtacaaggactttgaagaactcacccttgacttctgtcgtaaaggcaacatttatggc
cttgaaaaatactgggccttccaccattattgccgtctaggtgacaaagaaccaaagaaa
catccagaattggagaggttactgagagatgaatatcggaccttggaggacttccgtgcc
aaagagaagtccatgaagaaggacagtcattag

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