KEGG   Populus trichocarpa (black cottonwood): 7489334
Entry
7489334           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7489334 isoform X1
  KO
K15501  serine/threonine-protein phosphatase 6 regulatory subunit 3
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pop01009]
    7489334
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7489334
Protein phosphatases and associated proteins [BR:pop01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-6
    Regulatory subunits
     7489334
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Protein phosphatase 6
     7489334
SSDB
Motif
Pfam: SAPS XLF
Other DBs
NCBI-GeneID: 7489334
NCBI-ProteinID: XP_024464166
LinkDB
Position
9:2563381..2572412
AA seq 848 aa
MFWKLTTLSTSSPVESVLDKENFTLEELLDEEEIIQECKALNTRLINFLRDRAQVEQLLR
YIIEEPSEDAESKRTFKFPFIACEIFTCEIDVILKTLVEEEELMNLLFSFLEPNRSHSAL
LAGYFSKVVVCLMLRKTVSLMNYVQAHQDVFRQLVDLIGITSIMEVLVRLVGADDHVYPN
FTDVMQWLADSNLLEMIVDKLSPSNPPEVNANAAETLCAITRNAPSALATKLSSPSFVER
IFGHALEDSHSKSGLVNSLSVCISILDPKRSAMASPLMHSFRSQHMYESPIPVNPETISA
MLPKLGDLLMLLNVLSDEKILPTTYGELKPPLGKHRLKIVEFIAVLLRTGNEATEMELVS
SRTIERILDLFFEYPYNNALHHHVESIIMSCLETKSDAMVDHLLQECDLIGKFLQTDKNP
VISGDIIKPTLPAAGKQAPRVGNLGHITRISNKLVQLGNSSSRIQTYLQENSEWNEWQAS
VLQERNAVENVYRWACGRPTALQDRTRDSDEDDLHDRDYDVAALANNLSQAFRYKIYGNE
DNEEDNGGLDRDDEDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRIGDAPVS
TSPGEMMDQINLNGNTDANGGNSCSHDEVVVGEEDELTESKDSVNGTSTSNTNLLDQFPG
IGPVSLSSDANAPDTSFFKFEAPDNEDLFGDRPLPEWVGWGEPSDLQAAGGSTVNPFEDH
DSSDVNLSSQAEAATPDASSPSGGESILPNGLSPTKGSSDGSVSSDSSKKSPTSPSLFEE
DVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNIAPKVPEKEKSDDAEAENKEFNDANY
WRVDVVEG
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgttctggaagctcaccactctctctacctcttctcctgtggagtctgtattagacaaa
gaaaatttcactttggaagagcttctggatgaagaagaaataatccaagaatgcaaagcc
ttaaacacccgactcattaattttctgcgagatagagcccaggtggagcagttgctcaga
tacattattgaggaaccttcagaggatgctgaaagtaaacgaaccttcaagttccccttc
attgcttgtgagatatttacatgcgaaattgatgttattcttaaaactttagtggaagaa
gaggagttgatgaacctactcttctcgttcttggaaccaaatcggtctcatagtgccttg
cttgctgggtatttcagcaaagttgttgtttgccttatgttacgcaagacagtttcactt
atgaactatgtccaagcccatcaagatgttttccgccaacttgttgatttaattggaata
acctccatcatggaggttttggtccgcctggtaggagctgatgaccacgtttatcctaat
tttactgatgtgatgcaatggttggctgatagcaatttgctagaaatgatcgtggacaaa
ttgagtccttctaatcctcctgaagttaatgctaacgcagcagaaacattatgtgcaata
actcgaaatgctccatcagccttggctactaaactctctagtccaagttttgtggaaagg
atatttggtcatgcattggaagattcacattcaaaatctggtcttgtcaattcactttct
gtttgtatctctatactggatccaaaaagatcggcaatggcttctcccttgatgcattct
ttccgaagccaacatatgtacgagtctccaatccctgtaaatccagagactattagtgca
atgttacctaaacttggtgatttgcttatgctattgaatgtcttgtccgatgagaagatt
ttgccaacaacatatggagaactgaagcctcctcttgggaaacatcgtctaaagattgtg
gaattcattgcggtgctactaagaactggaaatgaagccactgaaatggagttggtcagc
tcgagaaccattgaaagaatccttgatctgttctttgagtacccgtacaataacgccttg
catcatcatgtagagagtatcataatgtcatgtttggagaccaagagtgatgctatggtt
gatcatcttcttcaagagtgtgatttgataggaaagtttctccaaacagataaaaaccct
gtaatatctggtgatattatcaagccaacccttcctgctgctggaaaacaagcaccacgg
gtaggaaaccttggacacattacacgaatttcaaataagcttgttcagttgggaaacagc
agtagccgtattcagacttatctacaggaaaatagtgaatggaatgagtggcaagccagt
gttttgcaagagcgcaatgcagttgaaaatgtctaccgatgggcttgcggccggccaaca
gcattgcaagataggacacgtgacagtgacgaggatgaccttcatgatcgagattatgat
gtagcagctctagccaacaacttaagccaggcttttagatacaaaatatatgggaatgag
gataatgaagaggacaatgggggccttgatcgtgatgatgaggatgtctactttgatgat
gagtctgccgaagttgttatatcatccctaaggcttggtgatgaccaagggagcagtctg
ttcacaaattcaaactggtttgcattccaagacgacagaattggtgatgcacctgtgagc
acatcgcccggagagatgatggatcagattaacttaaatggaaacacagatgcaaatggt
ggtaacagctgtagtcatgacgaggtggtggtgggagaggaagatgagttgactgaaagc
aaggattctgtcaatggcacatccacttccaacacaaacctccttgatcaatttcctggg
attggtccggtttcactaagtagtgatgcaaatgctcctgataccagcttcttcaaattt
gaggcaccagacaatgaagacttgtttggagataggcctttacctgaatgggtaggatgg
ggagagccatccgatttgcaagcagcaggggggtcaactgtgaatccatttgaagatcat
gacagctctgatgtcaatctttccagccaagctgaagcagcaacgcctgatgctagttcc
ccatcaggtggagagtctatacttccaaatgggttatcacccaccaagggttctagtgat
ggatcagttagcagtgattcaagtaaaaaatctcccacctcaccttccttgtttgaagag
gatgttgaatttgttggtgttgaattggaagggaccgagaaggcaatggaccaagctctc
aaggaggggatagttggtgaagcagggcctctgaagaggaatattgcaccaaaggtgcca
gagaaggagaagtctgatgatgccgaggcagagaacaaggagttcaacgatgcgaactat
tggagggttgatgttgtggaaggatga

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