KEGG   Populus trichocarpa (black cottonwood): 7489441
Entry
7489441           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7489441
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03060  Protein export
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    7489441
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pop02044]
    7489441
Secretion system [BR:pop02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   7489441
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N AAA_22 AAA_17 MMR_HSR1 AAA_16 DUF5693 AAA_19 TPP_enzyme_M AAA_30 CLP1_P MeaB nSTAND3 ETF SPOUT_MTase AAA_28 AAA_33
Other DBs
NCBI-GeneID: 7489441
NCBI-ProteinID: XP_002324537
UniProt: B9IMD0
LinkDB
Position
18:12490689..12494748
AA seq 622 aa
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAASYTL
KWTFHNELGLVFVAVYQRILHLLYVDELLEMVKREFSEIYDPKRVEYFDFDETFRQLRKE
ARAEELRKVKPMGNDGRKQQVVKKGSGGFDGGNKKNKSDAKEADGDDGKGRKLENGHSNG
NHNVVGEGNRGMGLANGKENARSNNGAFDVSKLQKLKSKGVKKTTDTSVVVSKDSKADPK
KKITKKNRVWDDSPKVAKLDFTDPVEENGNENIQVVAADQGESMMDKEEIISSDSEEDEE
DEEVGKDSKPDAKKKGWFSSMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAEKL
CESVAASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAREQRKPYVVV
FVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYE
KDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNNPDLVLFVGEALV
GNDAVDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVG
CGQSYTDLKKLNVKAIIKTLLK
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgttagagcagttgttaatatttactagaggaggattgattttatggacatgtaaagag
ctaggaaatgcgttaaaaggatcgccgatcgatactttgattcgatcttgtctgttggag
gaacgatcaggtgcggcgtcgtataattacgatgctcctggtgctgcctcgtacacgctt
aaatggactttccataacgagcttggtctcgtttttgtcgccgtgtatcagcgaattctc
catttgttgtatgtggatgagttgttggagatggtgaagcgtgagttttcggagatttat
gatccgaagcgtgtggagtattttgattttgatgagacttttaggcagcttaggaaggag
gcgagggcggaggagttgaggaaagtgaagccgatggggaatgatgggaggaagcagcag
gtggtgaaaaagggtagtggtgggtttgatggagggaataaaaaaaataagagtgatgcg
aaggaggctgatggtgatgatgggaaaggtaggaagttggagaatggacactccaatggg
aaccataatgttgttggtgaaggaaatagagggatgggtcttgctaatggtaaagaaaat
gcgagatccaataatggggcttttgatgtcagcaaacttcagaagctgaaaagtaaaggt
gtgaaaaaaactactgatactagtgttgttgttagcaaggattcgaaagcggacccgaag
aaaaagataacaaagaagaatagagtttgggatgattcacctaaagttgcgaaattggat
tttacggatcctgtggaggagaatgggaatgagaatatacaagttgtggcagccgatcaa
ggtgaaagcatgatggacaaagaagagataattagcagtgacagcgaggaggatgaagaa
gatgaggaagttggtaaggacagcaagcctgatgctaagaagaagggatggttttcatct
atgttccagagtattgctggtaaggcaaacttggagaaggcagacctagagccagctttg
aaagctctcaaggataggctcatgaccaagaatgtggctgaggagatagccgagaagctt
tgtgaatcagttgcggctagtcttgaaggtaaaaagctggcatctttcacaaggatatct
tccacagtgcaggctgctatggaagaagcacttgtccgtattttaactcctagacgctct
attgacatattgagggatgtacatgctgcaagggaacagaggaaaccatatgttgttgtt
tttgttggtgtcaatggggttggaaagtccacaaatctggctaaggttgcatactggctt
ctgcaacataaggtcagtgttatgatggctgcttgtgatacatttaggtcaggagctgtt
gagcagctgaggactcatgcacgtagacttcagatccctatatttgaaaagggctatgag
aaagatccagcggttgttgcaaaggaagcaattcaggaggctacacgcaatggttctgat
gttgttctcgttgatactgctggccgaatgcaggacaatgaaccattaatgagagctctc
tcaaagttaattaacctcaacaatcctgatctggtcttgtttgttggagaggccttggta
ggaaatgatgctgttgatcagctatcaaagttcaatcagaaattagcggacctatcaact
tcacccaatcctagattaattgatgggattttgctcaccaagtttgacacaatcgatgac
aaggtcggagctgcactgtcgatggtttacatctctggctcaccggtcatgtttgtaggc
tgtggtcaatcttacacagatctcaagaagttgaatgtgaaagctattatcaagactctc
cttaaatga

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