Populus trichocarpa (black cottonwood): 7489643
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Entry
7489643 CDS
T01077
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
7489643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7489643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7489643
Membrane trafficking [BR:
pop04131
]
SNARE
Syntaxin (Qa)
Stx-PM
7489643
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
7489643
Exosomal proteins of other body fluids (saliva and urine)
7489643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
DUF1942
IL3
T2SSF
UBR7_C
DPC2
Piezo_THU9_anchor
ALIX_LYPXL_bnd
STX6_10_61_N
SPACA6_N
LarA_C
ZapD
COR15
UBR4
Motif
Other DBs
NCBI-GeneID:
7489643
NCBI-ProteinID:
XP_002319678
UniProt:
B9I5T9
LinkDB
All DBs
Position
13:complement(3870464..3872106)
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AA seq
313 aa
AA seq
DB search
MNDLMTKSFMSYVDLKKEAMKDLEAGPDPVVEMANASNTMESNLGMFLEEAENVKKEMGS
IREILDQLQEANEESKTLHKPEALKSLRNKINTDIVTVQKKARSIKSQLEEMDRANAANR
RLSGYKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQKMMTEYKDTVGRRYFTVTGEYP
DEEVIDKIISDGSGGEEFLKRAIQEHGKGKVLETVVEIQDRHDAAKEIEKSLLELHQVFL
DMAVMVEAQGEQMDDIEHHVLNASHYVKDGTKELKGAKGYQKSSRKWMCIGIILLLIIIL
VIVIPIATSFSHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctaatgaccaaatccttcatgagctatgtggacctaaagaaagaggccatg
aaagatcttgaagctggtcctgaccctgttgtagaaatggcaaatgcatcaaacaccatg
gaaagcaaccttggtatgttccttgaagaagctgagaatgtcaagaaagaaatgggatcg
atccgtgagattcttgaccagctgcaagaagctaatgaagaaagcaagaccttacataaa
cccgaggccttaaaatcactacgaaacaaaatcaacacagatattgttactgtccagaaa
aaggccagaagtattaaatcccagcttgaagaaatggaccgagcaaatgctgctaatagg
cgcctctcagggtataaggaaggaactccgatttatagaacaaggattgccgttactaat
ggcttgcgcaagaaattgaaggagctgatgatggattttcaaggtctaaggcaaaaaatg
atgacggagtacaaagatactgttggtaggaggtatttcactgttactggagagtaccca
gatgaggaagtcattgataagatcatctctgatggtagtgggggtgaagagttcttgaaa
cgtgcaattcaggagcatgggaaagggaaggtgttggagactgtggtggaaattcaggat
agacatgatgctgccaaagagattgagaagagcttgttggagctgcaccaggtgtttttg
gacatggcagtgatggtggaggcgcagggggagcagatggatgatattgagcaccatgtg
ttgaatgctagccactatgtgaaggatggtaccaaagagctcaagggtgctaaaggttac
cagaagagcagcaggaagtggatgtgcattgggatcattcttcttttgataatcattcta
gtgattgttatacctattgctactagctttagtcactcttga
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