Populus trichocarpa (black cottonwood): 7489787
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Entry
7489787 CDS
T01077
Name
(RefSeq) MADS-box transcription factor 23 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7489787
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7489787
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
DNA_primase_lrg_N
Laminin_II
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
7489787
NCBI-ProteinID:
XP_002307325
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Position
5:complement(12860634..12873693)
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AA seq
240 aa
AA seq
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MGRGKIEIRRIDNSTSRQVTFSKRRGGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSST
SMKSVIERYNKSKEVHHLMGNPTSELKFWQRETAMLRQQLQNLQENHRQMMGEELSGLSV
KDLQNLENQLEMSLRGVRMKKDQNLMDEILELNRKGNLIHQENMELYKKANLICHENQEL
YKKVYGTREVNGANRNSLLTNGLGMGEESHVPVHLQLSQPQQQNYDTPASATKLGRLQLH
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggggagggggaagatagagataagaaggattgataattcgacaagcaggcaagtgacc
ttctcaaagaggaggggtgggttgttgaagaaagccaaggagctggcgatcctttgcgac
gcagaagttggagtcatgatcttctctagcaccggcaagctctatgatttctctagcacc
agcatgaaatcagtcattgaacgatacaacaaatcaaaagaggtgcatcatctaatgggc
aacccaacctcagaactcaagttctggcaaagggagacggcaatgttgagacagcaactg
caaaacttgcaagaaaatcatcggcaaatgatgggtgaagaactttctggcttaagcgta
aaggatttgcagaatttggagaaccaattggaaatgagtctccggggtgttcgcatgaaa
aaggaccaaaatttaatggatgaaatactagaactaaatagaaagggaaacctcattcac
caagaaaatatggaactctataagaaggcaaacctaatttgtcatgaaaatcaagaattg
tataagaaggtttatggaaccagagaagtaaatggagcaaacaggaattcccttctcaca
aatggtctgggcatgggagaggaatcacatgtacctgtccatctccagcttagccagcca
cagcaacaaaactatgatacaccagcaagtgctacaaagttgggcagactacaactgcat
tag
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