Populus trichocarpa (black cottonwood): 7489873
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Entry
7489873 CDS
T01077
Name
(RefSeq) centromere/kinetochore protein zw10 homolog
KO
K11578
protein transport protein DSL1/ZW10
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7489873
03036 Chromosome and associated proteins [BR:
pop03036
]
7489873
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
7489873
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
7489873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zw10_middle
ZW10_C
ZW10_C2
Zw10_N
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
7489873
NCBI-ProteinID:
XP_024451541
LinkDB
All DBs
Position
2:21095236..21103683
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AA seq
759 aa
AA seq
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MDALFDAINVRDLLSTSDLRDPTAPLSAPDLRLLITRLESHSLQIKSKVKSYILAHHSDF
SSLFSLCNDAVSRTDQINQCLLDLLALVSDSPIDGEIREIVEELSGKMKEAREKREILDL
VRIIVGISERLGGIKEGVKNGRLRLAAVDIRDLKKVLRIGDEEEREPVVYGLLRKEWLDC
FEEIQEMLVKFVENAVQFEPDSSIVRVKYRLSVDGIAGVVDLHSVLDSMEVIGILDYGFA
KVADQMIKHVIIPVVKKGSSISSMEDLKDVSKEMTEAILKILSTSNPMVDVDGEIIYSRI
IQVINFVCKCICFENPSWIRCFGRLTWPRISELVISNFLSKAVPEDASKLAGFQKIIKDT
YEFETALKEMAFISASDSTDQKLSNFAENVELHFASRKKIEILAKARNLLLQCDFTIPQE
YTRKGHPMKNSGTAVNYYEHVVDLLFLSERCLVSKAATQLMDLVHQTLKDICLSSPRVAL
EFYHAARDAILLYEAVVPVKLERQLDGVNQVAVLMHNDCFYLSQEILGLAFEYRSDFPIS
IKEHAVFVDLAPRFQVMAEEILQRQIQLVISNLKEAIDGADGFQNTHQVQQFESAKFSID
QVVFILEKVHIIWEPLLLPSTYKKSLCMVLESVFARVTKDILLLDDMAAEETLQLQRLIH
LMLESISSLMESLSTVIQKERPEEYHTSLVDDLIPSLRKIRKVAELLDMPLKSITTAWES
GELISIGFTMLEVKDFIKAIFTDSPLRKECLWRIENVGL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcttcgacgcaatcaacgttcgagaccttctctcaacgagtgatctcagg
gacccaaccgcacccctctccgcacccgatctccgcctgctcataacccgtctcgaatct
cactctctccaaatcaaatcgaaagtcaaatcctacatcctcgctcaccacagcgacttc
tcctctctcttctccctctgcaacgacgccgtttctcgaaccgaccagattaaccagtgc
ctattagatcttctagctctggtttccgattctccgattgatggcgagattagggagatt
gttgaggagttgagtgggaagatgaaggaggcgagggaaaagagggaaatattggatttg
gtgaggataattgtgggaattagtgagaggttgggagggataaaagagggagtgaagaat
ggacggctgagacttgcggctgttgatattagggatttgaagaaggtattgaggattggt
gatgaggaggagagagagcctgttgtgtatggtttgttgaggaaggagtggctcgattgc
ttcgaggagattcaagagatgcttgtgaaattcgtggaaaatgcagtgcagttcgagcca
gattctagtattgttcgagtcaagtatcggttgagtgttgatggcattgctggggttgtg
gatctccacagtgttttggattcaatggaagtgattggtatattagactatgggtttgct
aaagtggctgaccaaatgatcaagcatgtcatcattcctgttgtaaagaaaggatcatcc
atttcatccatggaagatctgaaagacgtctccaaagaaatgactgaggcaatattgaaa
atactatcaacaagcaatccaatggtcgatgtggatggtgagatcatctattcaaggatt
attcaggttataaactttgtttgcaagtgcatatgttttgagaatccttcttggattcga
tgctttggaaggttgacatggccaaggatatcagaacttgttatttctaactttctctcc
aaggctgtccctgaagatgcttctaaacttgctggctttcagaagatcatcaaagacaca
tatgagtttgaaactgctttgaaggagatggcatttatttcagcatctgatagcacagac
caaaagttgagcaactttgctgaaaatgtcgagcttcactttgcttctaggaagaagatc
gaaatcttggcaaaggctagaaatttgcttctacagtgtgacttcactattcctcaagaa
tatacaagaaaaggtcatccaatgaagaatagtgggacagctgtaaattattatgaacat
gttgttgacttgctttttctgtccgagaggtgtttggtgtccaaagcagctactcaactg
atggatcttgtacatcagacacttaaggacatttgcttgtcttctcccagagttgcattg
gagttctatcatgctgccagggatgctatccttctctatgaggctgttgttcctgtcaag
ctagaaaggcagcttgatggagtcaaccaggttgctgttctcatgcacaatgactgtttc
tatctatctcaagagatacttggactggcatttgagtatcgatcagactttccgatttcc
atcaaggaacatgctgtttttgttgatttagctcctcgatttcaagtaatggcagaggag
atactgcagagacaaattcagctcgttatttctaatttgaaagaggccatagatggtgct
gatggttttcagaacactcatcaggttcagcaatttgaatcagcaaaatttagcatagat
caggttgtttttattcttgaaaaagtacatattatctgggagccactcttgctgccatct
acttacaagaaaagcttgtgtatggttctagagtcggtttttgctagagtcacgaaagac
atactcctcctagatgatatggcagctgaggaaacattacagcttcaaagactgatccat
ttgatgctggaaagcatatcatctttaatggaatctctgagtactgtcattcaaaaggag
aggccagaagagtatcatacaagtcttgtagatgatctaataccatcattacgtaaaatc
cgtaaagttgcagaacttctggacatgcctttaaaatccattacaacagcttgggaaagt
ggggaactcatcagcattgggtttacgatgctagaggtaaaagatttcatcaaagcaata
tttacagactcccctctgcgaaaagaatgcctatggaggatagaaaacgtcggcctgtga
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integrated database retrieval system
