Populus trichocarpa (black cottonwood): 7489882
Help
Entry
7489882 CDS
T01077
Name
(RefSeq) plant UBX domain-containing protein 4
KO
K14012
UBX domain-containing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7489882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7489882
Membrane trafficking [BR:
pop04131
]
SNARE
SNARE associated proteins
Others
7489882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
UBA_OTUD7A_B
TAP_C
Motif
Other DBs
NCBI-GeneID:
7489882
NCBI-ProteinID:
XP_002301606
UniProt:
A9PA22
LinkDB
All DBs
Position
2:21422026..21424697
Genome browser
AA seq
429 aa
AA seq
DB search
MEDNTRAAAPPPPQPPNFDLNDTNNTALVDAFCEITSSSKQEALFFLESHQWDLDSAVST
FLDNDSAPPLVTAIPPLPSHPVNSASPSPSPSPPQSHSPNYSPSQSPSRSRSPSPIPSRA
PYRLRSRGKKPSANRTRGGVRTLADLNRTPNAGSDSDDDDDDEPQQYYTGGEKSGMLVQD
PSKRYDVDGIFDQARHSGAVERPADYHQPSSSSRSFPGTGRLLSGDTMVSSAPQPPAAVN
HAVTLWRNGFTVDDGPLRRFDDPANASFLESIKRSECPKELEPLDRGTQVHLDLMRREEN
YSEPEKPLVSFQGVGRALGSSSDTTVPAASEPTVASLKAAPVPTPGLVLDSSSPTTSIQL
RLADGTRMVSRFNLNHTIRDIRAFIEASRPGGASNYQLQTMGFPPKQLTDPDQTIEEAGI
ASSVVIQKF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaacacaagagcagcagcaccaccaccacctcagccaccaaatttcgatctc
aacgacaccaacaacaccgccttggtcgatgctttttgcgagatcacctcttcttccaaa
caagaagccctctttttcttagaaagtcaccaatgggatctagactccgctgtctctacc
ttcctcgacaacgactccgcccctcccctcgtaactgcaatccctcctcttccttctcac
cccgttaactctgcctctccctctccctctccttcccctccgcagtctcactcccccaat
tactctccctcccagtctccgtctcggtctcgctctccttctcccatcccgtctcgagct
ccctacaggctaagatcgaggggtaagaagcccagcgccaatcggacacgtggcggagtc
cgaacgcttgctgatcttaatcggacccctaatgctgggtccgatagtgatgacgatgac
gatgacgagccgcagcagtattatactggtggtgaaaagagtggaatgctggttcaagac
cctagcaaacgttatgatgtggatggaatttttgatcaagctcgacattcaggtgctgta
gaaagacctgctgattaccatcagccgtcttcgagctcgagaagcttccctggaacgggg
aggttgctttcaggggatacaatggtatcatctgctcctcaaccacctgcagctgtcaat
catgctgttactctatggaggaacgggttcacggtggatgatggccctttaaggaggttt
gatgatcccgctaatgcctcctttttggagagcatcaagcggtctgagtgtccaaaagag
cttgaaccattggatagggggactcaagtgcatcttgatctcatgcggcgagaggaaaac
tactctgaaccagagaagcctctagtttcattccaaggtgtgggaagagctttaggtagc
agcagtgacaccactgtccctgctgcctctgagccaaccgttgcttctctcaaggctgct
ccagtcccaaccccaggtctagtactagattcttcatcaccaacaacctcaattcagctc
aggttagctgatggcacgcgcatggtttctcgcttcaacttaaaccatactatcagagac
atacgtgccttcattgaggcatcaaggccaggtggggcaagcaattatcaactgcagaca
atgggattccctccaaaacagctcactgatccggatcagacgattgaggaggctggcata
gctagctctgttgtcatccagaaattctaa
DBGET
integrated database retrieval system
