Populus trichocarpa (black cottonwood): 7490009
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Entry
7490009 CDS
T01077
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP40 isoform X1
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7490009
Enzymes [BR:
pop01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
7490009
Chaperones and folding catalysts [BR:
pop03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
7490009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_7
TPR_14
TPR_6
MIT
TPR_19
TPR_12
TPR_NUP120_160
TPR_9
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
7490009
NCBI-ProteinID:
XP_002313093
UniProt:
B9HRW8
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All DBs
Position
9:complement(9254015..9257897)
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AA seq
370 aa
AA seq
DB search
MRRSRCFLDISIGGELEGRIVIELYNDVVPKTAENFRALCTGEKGVGPNTGVPLHYKGCC
FHRAIKGFMVQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANSGPNTNGSQF
FITTTRTSHLDGKHVVFGKVVKGMGVVRSMEHVTTGDADCPASDVIIVDCGEIPEDADDG
ICNFFKDGDAYPDWPADLNEIPNELSWWMSAVDSIKAFGNEHFKKQDYKMALKKYRKALR
YLDICWEKEGIDEEKSSALRKAKSQIFTNSAASKLKLGDLKGALVDTDFAIRDGENNAKA
LFRQGQAYMALNDVDAAAESFKKALQLEPNDAGIKRELNAARKKINERRDREKKQYEKMF
KTSDSTSAEP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtcaaggtgtttcctagacataagcataggaggtgagttggaaggaaggata
gtaatagagctctacaacgatgttgttcctaaaactgccgagaattttagagctctttgc
actggtgagaaaggcgttggacctaacaccggtgtccctcttcattacaagggatgttgt
tttcatcgtgctatcaaaggttttatggttcaaggtggagatatctctgctggagatggc
actggaggggaatctatttatggcttgaaatttgaggatgaaaattttgaactgaaacat
gaaaggaagggaatgttatccatggccaattctggcccaaacacaaatggttcacagttc
tttatcacgacaactcgcacttctcatttggatggaaaacatgttgtatttggcaaggtt
gttaaaggaatgggagttgttcgttcaatggagcatgttacaactggtgatgctgattgt
cctgcttctgatgttataattgttgattgtggagagattcccgaggatgcagatgatggg
atatgtaatttcttcaaggatggtgatgcttatcccgattggccagctgaccttaacgag
attcctaatgaactgtcatggtggatgagcgctgtagattctattaaggcttttggaaat
gaacatttcaagaaacaagactataagatggcgctaaaaaagtaccggaaggctttacgc
tatctggatatctgttgggagaaagaagggattgatgaagagaagagttcagctttgagg
aaggcgaagtcacagatattcacaaacagtgcagcttctaagttgaaattgggggatctg
aaaggagctcttgtggacacagactttgcaatacgtgatggagaaaacaatgctaaagct
ctttttcgccagggacaggcatacatggctctcaatgatgttgatgctgctgctgaaagc
ttcaagaaagcattgcagttggagccaaatgatgctggaataaaaagggagcttaatgct
gctaggaagaagattaatgagagacgtgatcgggagaaaaaacaatatgagaagatgttc
aaaacttcagatagtacttctgcagaaccgtag
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