Populus trichocarpa (black cottonwood): 7490172
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Entry
7490172 CDS
T01077
Name
(RefSeq) protein CHROMATIN REMODELING 24 isoform X1
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7490172
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
7490172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
7490172
NCBI-ProteinID:
XP_024460621
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Position
7:complement(12642721..12652594)
Genome browser
AA seq
1100 aa
AA seq
DB search
MAALSQSTHRKPISLNDRHYRLLQDVSAPPKQPPPPPPVTSFEEEEESVFNVKFDGRRRI
CKAEPEDDNIPKFCGITDFDSSPEEEKPTKVRIEGRRRLCKVSSGDDGDDASREEVKDDS
SFDDIADFDSPIPSKSVGDCGNNKGVNEIKDILSDLTSRLDLLSIEKKRVPENNNVVKKV
HVVEYASAESLFSLSSSPSDSSLDVIKNGGGDDESAVDEYEEGDLLSESFDDEVSRGLKK
NEYGRVDEKLVPVGKPFVSNVVEDESDVQIESNHDEYVTRVEKTKNVTQRVKENEPDGFN
ERLRSVGRSSVLSLRDESEDDEDDCVVLTGKKVVKKVGRPGAIAKYNVLSGESETAVLEN
HAESEDDGSIILPGLKSTYKLPGKIAKMLYPHQCEGLRWLWSLHCKGKGGILGDDMGLGK
TMQICSFLAGLFHSKLIKRVLVVAPKTLLTHWIKELSVVGLSGKTREYFGTSLKARDYEL
QYILQDKGILLTTYDIVRNNSKSLRGDHYFLDEESEDSYIWDYMILDEGHLIKNPSTQRA
KSLIEIPSAHCIVISGTPIQNNLKELWALFNFCCPDLLGDNKWFKQTYEHPILRGNEKNA
SDREKRIGSTVAMELRERIQPYFLRRMKNEVFKEDDATTAKLSRKNEIIVWLRLTTCQRQ
LYEAFLRSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVA
EKLAMHVADVAERTDFQEKHDSISCKISFVLSLLDNLIPEGHNVLIFSQTRKMLNLIEES
LVSNGYEFLRIDGTTKVTDRAKIVDDFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDP
AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTVEEKIYRKQIFKGGLFRTATENKEQIR
YFSQQDLRELFSLPKQGFNISLTQQQLHEEHDSQHKMDEYLESHIKFLESQGIAGVSHHS
LLFSKTETVQLAQEEEDEIRKKVSTMVGNSSSSYSLERNVDGAARAFNPKDVNLNKKTSS
PDSVGKLTESEILERINRLSQLLGNKVTVLRLPDQGAKLQKQISELNSVLIELRMEKATE
REGVISLDDLTGEFERGLNV
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctttcacaaagcacacacagaaaaccaattagtctgaacgatcgccattat
cgcctccttcaagacgtctctgctcctcccaaacaaccaccgcctccgccgccagtaacg
tccttcgaggaagaagaagagagcgtattcaacgtgaagttcgacggacgacgtcgtatt
tgcaaagcagaaccagaggatgataatatccctaaattctgtggaatcactgattttgat
tcttcacctgaagaagaaaagcctacgaaggttaggattgaaggaagacggagactttgc
aaagtatcttctggagatgatggggatgatgcaagtagagaagaagtgaaagatgattct
agttttgatgatattgccgattttgattcacccattccgtctaaaagtgttggtgattgt
ggtaataataagggtgttaatgagataaaagatattcttagtgatttgacctcaaggctt
gaccttttgtcaattgagaaaaagagagttcctgaaaataataatgtggtcaagaaagtt
catgtggttgaatatgcaagtgctgagtctttgttttctttgtcgtctagtccatctgat
tcctcattggatgttattaaaaatggtggaggtgatgatgagagtgctgtggatgagtat
gaggagggtgatttattgagtgagtcatttgatgatgaggttagcagagggctaaagaag
aacgaatatggaagggtggatgaaaagttagtccctgtgggaaaaccttttgtgtccaat
gttgtagaagatgaaagtgatgtgcagattgagtctaaccatgatgaatatgtaactagg
gtggagaaaactaagaacgttactcaaagagtgaaggaaaatgaacccgatgggttcaat
gagagattgaggtctgtaggacggtcttcggtgcttagtcttcgagatgaatcagaggat
gatgaagatgattgtgtggttttgaccggaaaaaaggtggtcaagaaagttgggagaccc
ggtgccattgccaagtataatgtattatctggtgaatctgagactgctgtgttggaaaat
catgcagagtcagaggatgatggttccattatcttgcctggactaaaatctacttacaag
ttacctggtaaaattgcaaaaatgctgtatccacatcagtgtgaaggtttaaggtggctc
tggtctttgcattgcaagggtaagggtggaatcttaggagatgacatgggcttgggaaaa
acgatgcagatttgtagctttctagcaggtctcttccattcgaaattgattaagagggta
ttggttgtggcccctaaaacactgctcactcattggattaaagaactatctgttgtgggg
ctttctgggaagactagagaatactttgggacctctttaaaagctcgggactatgagctg
caatatatacttcaggacaaaggaattcttctcacaacttatgatattgtgcggaacaac
tcaaaatctttacgaggggaccattactttcttgacgaggaaagtgaggatagttatatt
tgggactatatgattctagatgagggacatctcataaaaaatcctagtactcagagagcg
aaaagtttgattgagataccaagtgctcattgtattgtcattagtggcactccgattcaa
aacaatcttaaggaattgtgggctttgttcaacttctgttgtcctgaccttcttggtgac
aacaagtggtttaagcaaacatacgagcatcccatacttcgtggaaatgaaaaaaatgct
tctgatagggagaagcgtattggttcaacagttgcaatggaactaagagaacgcattcaa
ccttactttttgcgccgcatgaagaatgaagtattcaaggaagatgatgccacaactgct
aaactttcccgaaagaatgagatcattgtgtggcttagactaactacttgccagcggcaa
ctttatgaagcctttttgcggagcgagattgttctctcagcttttgatggctcgccattg
gctgcactaacgatattgaagaaaatatgtgatcacccgcttctcttgacaaaaagagcg
gctgaagatttgttagagggaatggagtccatgctaaatcctgaagatgttgctgtggct
gaaaaattggccatgcatgttgctgatgttgctgaaagaactgactttcaagagaagcat
gacagcatctcctgcaagatctcttttgtgttgtcactactggataatttgattccagag
ggacataatgttcttatattctctcaaactcgtaagatgcttaatctcatcgaggaatct
ctggtgtccaatggttatgagttcttacgcatagatggtacgacaaaagttactgataga
gcaaaaattgttgatgacttccaagaaggaaatggtgctcctatatttttgctaacatct
caggttggcggtcttggtcttacacttacaaaagcagatcgtgtgattgtggttgatcct
gcttggaatcctagcacggataaccaaagtgttgatcgtgcatatcgaattgggcaaaag
aaggatgtggtcgtatacagattaatgacttgtggaactgttgaagagaaaatttataga
aagcagatattcaagggggggttatttagaacagcaactgaaaacaaagaacaaattcga
tactttagccaacaggatctgcgggagctattcagtctccctaagcaggggttcaatatt
tccctcacacagcaacaattacatgaagagcatgacagccagcacaaaatggatgagtat
ctggaatcccacataaaattcttggagagtcaaggtatagcaggagtcagtcaccacagc
ttactcttctcaaagacagaaactgtacaacttgcacaggaagaagaggatgagataagg
aagaaagtatccacaatggtgggaaattcatcgtcaagctattcacttgaacgcaatgtt
gacggggctgctcgtgctttcaatcccaaggatgtaaatctgaacaagaaaacctcttct
ccagatagtgtgggcaaactgacagaatctgaaatcttagagagaatcaatcggctgtca
caattacttggaaataaggttaccgttttaaggttaccagaccaaggagcgaaactacag
aagcagattagtgaattaaattcagtgctcatcgagctgaggatggagaaagcaacagag
agagaaggagtcatcagtctggatgatttaactggggaattcgaaagaggattgaatgta
tag
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